| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0440 |
|---|
| Symbol | |
|---|
| ID | 8427375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 455970 |
|---|
| End bp | 456515 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 645032816 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003189994 |
|---|
| Protein GI | 258513772 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00588556 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTT CAGAGAGTGA ACTTATATCT GAAATAAAGA AGCGAAACTT GAACGCTTAT
GAATCCTTAA TCAAAGAGTA CACCAAGCCC GTTTATTATT TAACCTATAA CATTTTAAAC
ATCGGCAACA GTAAAGAGGA CATCGAAGAG TGCGTAGCCG ACGTCTTTTT GGAGGTTTGG
CTAAAAATCA ATGGATTTGA CAGCGAGAGA AGCAATTTCA AAACCTGGGT TTTAATTATC
ACAAAATATA AAGCTCTTAC ATATAAGCGC AAACTTAAAA AAAATCATGT TGAAAACATT
GATGATTACC AGCTTGAGGA GTCCGATACC GTTGAAAGAC AGATCATCGA TAGAGAAACA
CAGAAAAAAC TGCTGGAAAT AATCAATAGC TTTAATAAAA CGGACAAGGA ACTTTTTATC
CGCAGGTATT TTTACAACGA GAAAATTAGC GATATTATGC AATCTTTGGG GTTGAGCCGT
TCGGCGCTGG ACAACAGGCT CTTAAGAGGC AGAAAAATAA TCAAGGAGGT TTTATCCTAT
GACTGA
|
|---|
| Protein sequence | MNFSESELIS EIKKRNLNAY ESLIKEYTKP VYYLTYNILN IGNSKEDIEE CVADVFLEVW
LKINGFDSER SNFKTWVLII TKYKALTYKR KLKKNHVENI DDYQLEESDT VERQIIDRET
QKKLLEIINS FNKTDKELFI RRYFYNEKIS DIMQSLGLSR SALDNRLLRG RKIIKEVLSY
D
|
|---|
| |