Gene Dtox_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0330 
Symbol 
ID8427265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp341182 
End bp342072 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content46% 
IMG OID645032728 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003189906 
Protein GI258513684 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0816987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGTAA AAACATTTAA GCACAAATGG AAGTCGTCTG GATTTCCATT AAAATCTTTA 
CCCGGGTTTT TGTCCAAACT TTCTTGGTCG GGGACAGCCG GTATAGCAGT GATTTTAGCG
GTTCTGTTAA TAGCTGTTCT TGCACCCTGG ATTGCTGTCT ACCCGCACAA TCTTTCTTCC
GGTGCACCTC TTTTACCGCC TGGTAAAGAA CATTTTTTAG GCACCGATGA ATTAGGTGTT
GATCTCTGGG CCCAGATATG TTTTGGAGCC AGGGTCAGCC TGCTGGTGGG GCTGGGCACA
GCTTTGCTGG CGGCTCTGGG TGGTGGTCTG ATAGGCATTG CAGCAGGATA TTCGGGTGGC
TGGATCGATA AGCTGTTAAT GAGATTAATA GATATTATGA TTGTATTGCC TGATTTGCCG
GTAATGATTG TTCTGGCAGC CTTTATCGGT CCCAGCCTGA CGAACATTAT TTTAGTGCTG
GCTCTGTTTT CCTGGGTTTT TCCGGCCAGG ATTGTGCGTT CCCAGGTACT GATGTTAAAA
GAACAGAATT ATATTAAGTC AGCGGAGACC TATGGAGCGG GTACCTGGTA TCTAATACGG
AGGCATTTTC TTCCCGAGCT TTTTCCTTTG CTGGCTGTGA ATATGATCAG GCTTACGGGA
AGAGCAATTG TTGCTGAAGC AGGACTTTCT TTTTTAGGGC TGGGAGATCC TACTTCAAAA
AGTTGGGGTT TGATTTTACA TCACGCTACC AGTTTTCGAG GAATCTATTA TACCGATTTT
TGGAAGTGGT GGCTTTTGTA TCCCTGGCTG GCTCTGATGC TGATGGTAAC TTCTCTGGCT
TTTATCAGCC GTGAGCTGGA ACGGATAGTT GATCCTCGTA TGGGAAGGTA A
 
Protein sequence
MLVKTFKHKW KSSGFPLKSL PGFLSKLSWS GTAGIAVILA VLLIAVLAPW IAVYPHNLSS 
GAPLLPPGKE HFLGTDELGV DLWAQICFGA RVSLLVGLGT ALLAALGGGL IGIAAGYSGG
WIDKLLMRLI DIMIVLPDLP VMIVLAAFIG PSLTNIILVL ALFSWVFPAR IVRSQVLMLK
EQNYIKSAET YGAGTWYLIR RHFLPELFPL LAVNMIRLTG RAIVAEAGLS FLGLGDPTSK
SWGLILHHAT SFRGIYYTDF WKWWLLYPWL ALMLMVTSLA FISRELERIV DPRMGR