Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0330 |
Symbol | |
ID | 8427265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 341182 |
End bp | 342072 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645032728 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003189906 |
Protein GI | 258513684 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0816987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTGTAA AAACATTTAA GCACAAATGG AAGTCGTCTG GATTTCCATT AAAATCTTTA CCCGGGTTTT TGTCCAAACT TTCTTGGTCG GGGACAGCCG GTATAGCAGT GATTTTAGCG GTTCTGTTAA TAGCTGTTCT TGCACCCTGG ATTGCTGTCT ACCCGCACAA TCTTTCTTCC GGTGCACCTC TTTTACCGCC TGGTAAAGAA CATTTTTTAG GCACCGATGA ATTAGGTGTT GATCTCTGGG CCCAGATATG TTTTGGAGCC AGGGTCAGCC TGCTGGTGGG GCTGGGCACA GCTTTGCTGG CGGCTCTGGG TGGTGGTCTG ATAGGCATTG CAGCAGGATA TTCGGGTGGC TGGATCGATA AGCTGTTAAT GAGATTAATA GATATTATGA TTGTATTGCC TGATTTGCCG GTAATGATTG TTCTGGCAGC CTTTATCGGT CCCAGCCTGA CGAACATTAT TTTAGTGCTG GCTCTGTTTT CCTGGGTTTT TCCGGCCAGG ATTGTGCGTT CCCAGGTACT GATGTTAAAA GAACAGAATT ATATTAAGTC AGCGGAGACC TATGGAGCGG GTACCTGGTA TCTAATACGG AGGCATTTTC TTCCCGAGCT TTTTCCTTTG CTGGCTGTGA ATATGATCAG GCTTACGGGA AGAGCAATTG TTGCTGAAGC AGGACTTTCT TTTTTAGGGC TGGGAGATCC TACTTCAAAA AGTTGGGGTT TGATTTTACA TCACGCTACC AGTTTTCGAG GAATCTATTA TACCGATTTT TGGAAGTGGT GGCTTTTGTA TCCCTGGCTG GCTCTGATGC TGATGGTAAC TTCTCTGGCT TTTATCAGCC GTGAGCTGGA ACGGATAGTT GATCCTCGTA TGGGAAGGTA A
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Protein sequence | MLVKTFKHKW KSSGFPLKSL PGFLSKLSWS GTAGIAVILA VLLIAVLAPW IAVYPHNLSS GAPLLPPGKE HFLGTDELGV DLWAQICFGA RVSLLVGLGT ALLAALGGGL IGIAAGYSGG WIDKLLMRLI DIMIVLPDLP VMIVLAAFIG PSLTNIILVL ALFSWVFPAR IVRSQVLMLK EQNYIKSAET YGAGTWYLIR RHFLPELFPL LAVNMIRLTG RAIVAEAGLS FLGLGDPTSK SWGLILHHAT SFRGIYYTDF WKWWLLYPWL ALMLMVTSLA FISRELERIV DPRMGR
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