Gene Dtox_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0188 
Symbol 
ID8427112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp209725 
End bp210555 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content39% 
IMG OID645032575 
Productthymidylate synthase 
Protein accessionYP_003189764 
Protein GI258513542 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAAG CAGACGATGT TTTTATCGGA ATGTGCAAGG AGATCCTTGA TAAAGGAATT 
TCTTCTGAGG GTGAGGAGGT AAGAGCTAAG TGGACTGACG GTATGCCGGC CCATACTATT
AAGAGGTTCG CCGTTGTTAA CAGGTATAAT CTTTCAGAAG AGTTTCCCAT CCTGACACTA
AGGCCAACCA ACCTGAAAGC TGCAATTGAT GAGCTGCTCT GGATATGGCA AAAGAAATCG
AACAACATTA ATGATCTTAA TAGCAGTATT TGGGATAGCT GGGCTAACGA TGAGGGTTCA
ATTGGAAAAG CTTACGGGTA TCAACTGGGT ATTAAACATA AGTACCGTGA AGGTGAATTT
GATCAAGTTG ACAGAATTTT GTATGATTTA AGGCATACCC CGTATAGCAG AAGGATTATT
GCTAACATGT ACAACCACAG TGACCTGCAT GAGATGAACT TATATCCTTG CGCTTATAGT
ATGACTTTTA ATGTTACCGG TCGAAAACTA AATGCAATAC TAAATCAACG ATCTCAGGAT
GTTTTGGTTG CAAATAACTG GAATGTGGCT CAATATGCCA TTCTTATACA TATGTTTGCG
CAAGTAAGCA GCTTTGAAGC CGGTGAATTC GTGCATGTTA TTGCTGATGC GCATATATAT
GACAGACATA TACCGATAAT AAAGGAACTT ATCCAGAGAA CTTCCTATCC GGCGCCCAGG
TTATTAATTA ATCCGGATAA AAAACACTTC TACGACTTTA CAGTTGATGA TTTTCTTTTA
GAGGGTTATC AGACTAATGA ACAGATAAGA AATATCCCTG TCGCTGTTTG A
 
Protein sequence
MSKADDVFIG MCKEILDKGI SSEGEEVRAK WTDGMPAHTI KRFAVVNRYN LSEEFPILTL 
RPTNLKAAID ELLWIWQKKS NNINDLNSSI WDSWANDEGS IGKAYGYQLG IKHKYREGEF
DQVDRILYDL RHTPYSRRII ANMYNHSDLH EMNLYPCAYS MTFNVTGRKL NAILNQRSQD
VLVANNWNVA QYAILIHMFA QVSSFEAGEF VHVIADAHIY DRHIPIIKEL IQRTSYPAPR
LLINPDKKHF YDFTVDDFLL EGYQTNEQIR NIPVAV