Gene Dtox_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0170 
Symbol 
ID8427094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp191492 
End bp192628 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content47% 
IMG OID645032559 
ProductPolysulphide reductase NrfD 
Protein accessionYP_003189748 
Protein GI258513526 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGA AATGGCATTT TAGAATGACT CCGGTCAGAG CAGTGCTGCT GTGCCTGTCT 
CTTCTGGCCG TAGTCCTGGC GGTTTATCGC CTGGTTTTTG GCCTGGGCAG TGCTACCAAC
TTAAATGACC GGTGGCCCTG GGGGTTATGG ATAGGCTTTG ACGTTTTAAC TGGTGTGGCA
CTGGCCGGAG GTGGTTACAG CACTTGCCTG CTTGTGCATG TACTAAGAAT AAATAAATTT
AAACCGATTG TCAGAAGTGC TATGTTAACG TCTCTAATAG GTTACCTGCT GGTTATGGGC
GGCCTCTTTT TAGATATCGG GCGCTGGTTT AATTTCTGGG CTCCCTTTGT TTCCTGGGGC
TACCACAGTG TCTTATTTGA AGTGTTCTGG TGTGTTTCGA TATATACTTT GATTCAAACG
CTGGAATTTG GTGAAATCGC GACAGAGAAA GTGGGCCGCT CCTGGCACGG TTTTTTCAAA
AAAATAATGC CGGTACTTTT TATCGTTGGT ATTGTTTTGC CCACCCTGCA CCAGTCATCG
CTGGGTTCCC TGTATGTTAT TGAGGTTGGT AAATTATATC CCCTCTGGTG GTCTATGCTG
CTGCCTCTTT TTTTCCTGAT GTCTTCCTTT TTCGTGGGTC CGGCTATGGT GGTGGTGGAA
ACCACTCTGG CCGGTAAAGC GCACGGTCAC CAGGTTGAAA CCTCTGTTTT GCAAAGCCTG
GTCAAAGTCT CCGGTTCAGT TATGCTGGTT TATCTTATTT TGAAAATTGC TGATTTGTTT
TATCGCCATA AGGCGGGACT GGTCTTGGCC GGAAATTTCG AAGGGTATAT GTTCTTGCTG
GAAATGCTGG CCGGTATTAT AATTCCTCTT ATTATATGTT TCACCCCCGG GTTGCGCTCC
ACAAAGGGAG GGTTGCTTGC CTTCAGCTTG CTGGTGGTAG CCGGGGTAAT CATTAACCGT
ATGAATGTTG TCTTTACCGG TATGTCCCGT TACATGGGCG GCAGCTACTT TCCTTCCTTT
ATTGAGTGGG CAGTCAGTAT TGGCCTGATA TCTGCCGGTG TTCTGGCTTA CCTGTTTATT
GTGGAGAATT TCAATATTCT TTCTGAGGAA CCCCGGGTCA AAGAGATTGC GCATTAG
 
Protein sequence
MQKKWHFRMT PVRAVLLCLS LLAVVLAVYR LVFGLGSATN LNDRWPWGLW IGFDVLTGVA 
LAGGGYSTCL LVHVLRINKF KPIVRSAMLT SLIGYLLVMG GLFLDIGRWF NFWAPFVSWG
YHSVLFEVFW CVSIYTLIQT LEFGEIATEK VGRSWHGFFK KIMPVLFIVG IVLPTLHQSS
LGSLYVIEVG KLYPLWWSML LPLFFLMSSF FVGPAMVVVE TTLAGKAHGH QVETSVLQSL
VKVSGSVMLV YLILKIADLF YRHKAGLVLA GNFEGYMFLL EMLAGIIIPL IICFTPGLRS
TKGGLLAFSL LVVAGVIINR MNVVFTGMSR YMGGSYFPSF IEWAVSIGLI SAGVLAYLFI
VENFNILSEE PRVKEIAH