| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_6016 |
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| Symbol | |
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| ID | 5712082 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 619764 |
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| End bp | 622680 |
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| Gene Length | 2917 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | 23SrRNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCTGGATCAA ATCAAGCGCG AAAAGGGCGT TTGGCGAATG CCTTGGCAGC AAGAGGCGAT
GAAGGACGTG ATACTCTGCG ATAAGCTTGG GGGAGCCGAG AATAGGCTTT GATCCCAGGA
TCTCCGAATG GGGCAACCCA CCTGAATATA CTCTGTTATT GCTTCGCAAT AACGTTCACT
CCGTGCCTGC TCAATGCAGG TACACCGATC CTTCGGATCG GCACTGGGGA GGGCGGCGAA
GTGGTTATCA GGCTATATAG CCAGGTACTT TAGGACTGAA TACATAGGTC TTAAAGAGCA
AACCCGGGGA ACTGAAACAT CTAAGTACCC GGAGGAAAGG ACATCAACAG ATACTCCCCT
AGTAGCGGCG AGCGAACGGG GACCAGCCGA GCCATGCGAG TGACAAGAAC TGTTTGGAAA
GACAGGCCAT AGTGGGTGAC AGCCCCGTAT TGGAAGCTCA ATTGGACGTA TTAAGTAGGG
CGGGACACGT GAAATCCTGT CTGAACATCG GGGGACCACC CTCGAAGGCT AAGTACTCCT
TGCTGACCGA TAGTGAACCA GTACCGTGAG GGAAAGGTGA AAAGCACCCC GACGAGGGGA
GTGAAACAGT TTCTGAAACC GGACGCCTAC AAGCAGTCGG AGCCACATCA GTGGTGACGG
CGTACCTTTT GTATAATGGG TCATCGACTT GGTCTCACGA GCAAGCTTAA GCCGTTAGGT
GTAGGCGCAG CGAAAGCGAG TCTTAATAGG GCGCATGAGT TCGTGGGATC AGACCCGAAA
CCGAGTGATC TAGGCATGAT CAGGATGAAG GTTGGGTAAC ACCAACTGGA GGTCCGAACC
CACACCTGTT GAAAAAGGTC GGGATGAATT GTGCCTAGGG GTGAAAGGCC AATCAAACTC
GGAGATAGCT GGTTCTCTGC GAAATCTATT TAGGTAGAGC GTCATCCGAA TACCCCGGGG
GGTAGAGCAC TGGATGGGTA ATGGGGCCCC ACAGGCTTAC TGATCCTAAC CAAACTCCGA
ATACCCGGGA GTACTAGATG GCAGACACAC TGCGGATGCT AACGTCCGTA GTGGAGAGGG
AAACAACCCT GACCTACAGC TAAGGCCCCC AATTCATGGC TAAGTGGGAA AGCAGGTGGG
ACGACCAAAA CAACCAGGAG GTTGGCTTAG AAGCAGCCAT CCTTTAAAGA TAGCGTAACA
GCTCACTGGT CTAAACAAGT TGTCCTGCGG CGAAGATGTA ACGGGGCTCA AGCCATGAGC
CGAAGCTTAG GATGCACGTA GTGCATGGTA GCAGAGCGTG GTGTGACATA ACCCATTCCT
CTTGAGGATC TTCGGATCCT GCGGAGGACC GGGTTTGACT GTGAAGCCGG CGCGTGAGCG
ATCCGGTGGA GTGATCACCA GTGAGAATGA TGACATGAGT AGCGACAAAC AGGGTGAGAG
ACCCTGTCGC CGAAAGTCCA AGGGTTCCTG CTTAAAGTTA ATCTGAGCAG GGTAAGCCGA
CCCCTAAGGC GAGGCCGAAA GGCGTAGTCG ATGGGAACCA GGTTAATATT CCTGGGCCAG
GAGGATGTGA CGGATCGAGA CTGTTGTTCA CCCTTATCGG ATTGGGTGGG CCGCTGATCG
GTTCCTGGAA ATAGCCCTCC ATGAGATCGT ACCCTAAACC GACACAGGTG GACTGGTAGA
GAATACCAAG GCGCTTGAGA GAACGATGTT GAAGGAACTC GGCAAAATAC CTCCGTAAGT
TCGCGAGAAG GAGGCCCCGT TCGTAGGCAA CTATGGGCGG GGGGCACAAA CCAGGGGGTG
GCGACTGTTT ACTAAAAACA CAGGGCTCTG CGAAGTCGCA AGACGACGTA TAGGGTCTGA
CGCCTGCCCG GTGCCGGAAG GTTAAAAGGA GGTGTGCAAG CACCGAATTG AAGCCCCGGT
AAACGGCGGC CGTAACTATA ACGGTCCTAA GGTAGCGAAA TTCCTTGTCG GGTAAGTTCC
GACCTGCACG AATGGCGTAA CGACTTCCCC GCTGTCTCCA ACATCGACTC AGCGAAATTG
AATTGCCTGT CAAGATGCAG GCTTCCCGCG GTTAGACGGA AAGACCCCGT GCACCTTTAC
TACAGCTTCA CACTGGCATC AGGCCATGCA TGTGCAGGAT AGGTGGTAGG CTTTGAAGCA
GGAACGCCAG TTCCTGTGGA GCCTCCCTTG AGATACCACC CTTGCATCGC TTGATGTCTA
ACCGCGGTCC GTTATCCGGA TCCGGGACCC TGTGTGGCGG GTAGTTTGAC TGGGGCGGTC
GCCTCCTAAA GCGTAACGGA GGCGCGCGAA GGTTGGCTCA GAGCGGTCGG AAATCGCTCG
TTGAGTGCAA TGGCAGAAGC CAGCCTGACT GCGAGACTGA CAAGTCGAGC AGAGTCGAAA
GACGGCCATA GTGATCCGGT GGTCCCGAGT GGAAGGGCCA TCGCTCAACG GATAAAAGGT
ACGCCGGGGA TAACAGGCTG ATGGTGCCCA AGAGTCCATA TCGACGGCAC CGTTTGGCAC
CTCGATGTCG GCTCATCTCA TCCTGGGGCT GGAGCAGGTC CCAAGGGTAC GGCTGTTCGC
CGTTTAAAGA GGTACGTGAG CTGGGTTTAG AACGTCGTGA GACAGTTCGG TCCCTATCTG
CCGTGGGTGT AGGATACTTG AGAGGAGTTG CCCCTAGTAC GAGAGGACCG GGGTGAACGA
TCCACTGGTG GACCAGTTGT CGTGCCAACG GCAGTGCTGG GTAGCTATGA TCGGACAGGA
TAACCGCTGA AGGCATCTAA GCGGGAAGCC CCCCTCAAAA CAAGGTATCC CTGAGGACCG
TGGTAGACCA CCACGTCGAT AGGCCGGAGG TGTAAGCGCA GCAATGCGCT CAGCTGACCG
GTACTAATGG TCCGATAGGC TTGATTTGAT CCAGTAG
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| Protein sequence | |
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