| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4218 |
|---|
| Symbol | |
|---|
| ID | 5714747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009959 |
|---|
| Strand | + |
|---|
| Start bp | 66272 |
|---|
| End bp | 67225 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641277113 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001542409 |
|---|
| Protein GI | 159046741 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TGACAGTCAC CGCCATGTTG GCGGCCAGCG TGGCGATGAC GGGGACGGCC
CTGGCCGATG ATTTCCCGCA GCGGCCCATC AACCTGATTG CCCCGTTCAA CGCCGGGGGC
GGCACCGACC TGCTGCTGCG CGGATTCGCG CCGCATTTTG CCGAAGCGAT TGGCGGCGAC
GCCTTCGTGT CGAACATGGC GGGCGGCTCC GGCACCGTGG CGGCGGGTGC GCTGGCCGGG
CAGCGGCCCG ATGGTTACCA GTTGGGCTAT TTCTCGATCA CGGTGTCGAC CATTCAGCCG
CAGATCAAGG ACGTGCCCTA TGACGTGGAC AGCTGGACGC CGATCTGTTC GGTCGCGGCC
TCGCCCACCT TGTTGTTTAC CACCGCCGAC AGCCCCTACA CCACCATCGA AGAGGCGGTT
GCCGCGATCG AGGCGGAGCC GGGCAAGCTG ATCTATGGCT CCTCCGGGCC AGGGGCGATG
ACCCATCTGA CCACCGTGGC GGGCTTTGCC GGTCTGGGCG TGCTGGACAA GCTCAAGCAT
CTGCCGTTCC AGGGCTCGGG CCCCGCGGTG CAGGCGATGC AGGCGGGCAC GATCCAGTTT
TTCGGGGATA CCGAGATCCT GATGACGCGG GGCGATTTCC GGCCCTTGAT GGTGTTCAAT
GATGAGCGGC TGGAGAATTA CCCGGACGTG CCCACGGCCG CCGAGGCCGG GATCGAACCG
CCGCTGAACG AGCTGTATCT CTGGGGCGGG TTGTTCGCCC CGGCGGGGGT GGAGCCCGAG
GTGGTCGCCA AGCTGGAAGC GGCCTGCGAG GCGGCGGTGA ATTCCGAGGG CTTCCAGGAG
TTCGCGGCGA ACACCGCGAC CGTGATCGAC TATCGCGGCG CGGAGGAGTT CGAGGCGTTC
TTCCGGGCGC AATACGAGGC CAATGGTGCC CTGATCGAGG CTGCGGGCCT GTAA
|
|---|
| Protein sequence | MKILTVTAML AASVAMTGTA LADDFPQRPI NLIAPFNAGG GTDLLLRGFA PHFAEAIGGD
AFVSNMAGGS GTVAAGALAG QRPDGYQLGY FSITVSTIQP QIKDVPYDVD SWTPICSVAA
SPTLLFTTAD SPYTTIEEAV AAIEAEPGKL IYGSSGPGAM THLTTVAGFA GLGVLDKLKH
LPFQGSGPAV QAMQAGTIQF FGDTEILMTR GDFRPLMVFN DERLENYPDV PTAAEAGIEP
PLNELYLWGG LFAPAGVEPE VVAKLEAACE AAVNSEGFQE FAANTATVID YRGAEEFEAF
FRAQYEANGA LIEAAGL
|
|---|
| |