Gene Dshi_4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4201 
Symbol 
ID5714702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp47573 
End bp48073 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID641277096 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001542392 
Protein GI159046724 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.998013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA TGTTCCGCGA CAAGATCGAT GTCGAGATCA CCGTGAACGG CGAACCGGTG 
GAGGCCCGCG TGCCCGCTGG TCAGCACCTG ATCGACTTCT TGCGCCAGAC CGTTGGGCTG
ACCGGCGCGC ATGCCTCCTG CGAACACGGC GTCTGCGGCG CCTGCACGGT CGAAGTCGAC
GGCGCGTCCG TGCGCGGCTG CCTGATGCTG GCGGCGCAGG CCGACGGGGC CGAGGTCTGG
ACCGTCGAGG GGCTGACCGA ACGGGGCCGC ATCGCCGACC TGCAAGCGGC CTTCATCGCC
CATAACGCCC TGCAATGCGG CTTCTGCACG CCGGGCATGC TGGTGGCCTG CGACGAGCTT
CTGCGCCGCG GCGGCACCCC CTCCCGCGCG GAGATCCGCG AACACCTGTC GGGCAATTAC
TGCCGCTGCA CGGGCTACGA GGCCATCGTG GACGCGGTCG AAACCGTCGC CAAGGCACGC
GCCGGAAAGG GGGCTGCATG A
 
Protein sequence
MTEMFRDKID VEITVNGEPV EARVPAGQHL IDFLRQTVGL TGAHASCEHG VCGACTVEVD 
GASVRGCLML AAQADGAEVW TVEGLTERGR IADLQAAFIA HNALQCGFCT PGMLVACDEL
LRRGGTPSRA EIREHLSGNY CRCTGYEAIV DAVETVAKAR AGKGAA