| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4196 |
|---|
| Symbol | |
|---|
| ID | 5714697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009959 |
|---|
| Strand | - |
|---|
| Start bp | 43389 |
|---|
| End bp | 43895 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641277091 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001542387 |
|---|
| Protein GI | 159046719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.393076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.876194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGGA CGGATCGGCA GCCTACGGCG CAGTCGGGCG AGGTCGCCCG GCTGCTGTCC
TACATCGCCC TGCTGGCGGT GTCGGTGGGG CTGTTCATCG AGGCGCGCGC GATCCCGACC
TCGCGGTTCG AGGTGCTGGG TGCGGGGGCA TTCCCGATGC TGGTCCATGG CTGTCTGAGC
CTGCTGCTGA TCGGGTCGAT CGCAGGCTCG CTGCGCAAGC TGCCCGGGGA CGCTTATGGG
CGGTTCGTGT CCGATGTGCT GCTCTGGGTA CGGACCCGGC GGCTGGTGAT CGTGCTGTTC
GTCTGCCTCG GGGTTTATGT ATTGAGCATG CCGGTGCTGG GCTACCCGGT GGCGACCTTC
TTCTTTCTTC TGGTGTTGCA GGTCACGCTG GCGCCGAAGA CGCGGCTGGC CTTCGGCATC
GCCCTGGCGC TCGCGCTGAT CTTTTCCTTC GGGTTGAACT GGCTCTTTGC CGAGGTGTTT
AACGTGTTTC TGCCGCGGGG GGGCTGA
|
|---|
| Protein sequence | MSGTDRQPTA QSGEVARLLS YIALLAVSVG LFIEARAIPT SRFEVLGAGA FPMLVHGCLS
LLLIGSIAGS LRKLPGDAYG RFVSDVLLWV RTRRLVIVLF VCLGVYVLSM PVLGYPVATF
FFLLVLQVTL APKTRLAFGI ALALALIFSF GLNWLFAEVF NVFLPRGG
|
|---|
| |