Gene Dshi_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4113 
Symbol 
ID5714652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp45840 
End bp46232 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content68% 
IMG OID641277015 
Productdeath-on-curing family protein 
Protein accessionYP_001542311 
Protein GI159046642 
COG category[R] General function prediction only 
COG ID[COG3654] Prophage maintenance system killer protein 
TIGRFAM ID[TIGR01550] death-on-curing family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0149203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAGC CCTTTTGGGT TTCGCAGGCC GGGGTGCTGC GGATCCACGA CCTGGGTCTC 
GAGATCGGCG GCGGGGCTGC GGGGCTGCGC GACGCGGGAC TTCTGGCCTC GGCCCTGGCG
CGTCCGGTCA ACCTGTGGGC CTATGGAGAG ACCGATCTGT TCGTGTTGGC GGCAGCCTAT
GCCGAGGGGA TCGCGGGCAA TCATCCGTTC GTGGACGGCA ACAAGCGTAC GGGTTTCATG
ACGGCGGATG TGTTTCTGGC CCGGCATGGC TGGCTTCTGT CGCCGGTGAC CGATGAGACC
CATGCGGACA TGATGGTGGC GCTGGCCCGG GGGCAGATCG ACCGGGGGCA GGCGGCGGCG
CATTTTCGGG ATCACGCCGC CCCCGTGCCC TGA
 
Protein sequence
MTEPFWVSQA GVLRIHDLGL EIGGGAAGLR DAGLLASALA RPVNLWAYGE TDLFVLAAAY 
AEGIAGNHPF VDGNKRTGFM TADVFLARHG WLLSPVTDET HADMMVALAR GQIDRGQAAA
HFRDHAAPVP