Gene Dshi_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4058 
Symbol 
ID5714587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp117985 
End bp118443 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content56% 
IMG OID641276970 
Productcytochrome c class I 
Protein accessionYP_001542266 
Protein GI159046596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAT TAACTGCGCT GATTGGTGCC GTTTTTGTTA TCGGCGGGGG TTTTGCCGTT 
TGGCAGTTCG TTGGAGCCGA AGATTTAGCG GTTGGCCACT CCATGACGCC ACCTGACACA
AGCGAGATTG CCGAAGGCGA TCCGATCGTC CAGGTCCAGC TGCCTGACGC ACTCTCGCAG
CAGGCGGCGC TTGGGAAGAA CATATTCGAG GCAAAATGTT CCGAGTGTCA CGGCGAAAAT
GCCGCCGGTC GCAACGGTGT TGCGCCGCCT CTCGTGCACA AGATCTACGA ACCGAGCCAC
CATTCGGACA TGGCTTTTGT TCTGGCAGCT CAAAACGGCG TCCGTGCACA TCACTGGAAT
TTCGGTAATA TGCCTAAGAT CGAGGGATTG ACCCAAGGAG ACGTCAAGAT GGTGGCCGCC
TATGTCCGCG AATTGCAGCG GGCCAACGGG ATCAACTGA
 
Protein sequence
MDKLTALIGA VFVIGGGFAV WQFVGAEDLA VGHSMTPPDT SEIAEGDPIV QVQLPDALSQ 
QAALGKNIFE AKCSECHGEN AAGRNGVAPP LVHKIYEPSH HSDMAFVLAA QNGVRAHHWN
FGNMPKIEGL TQGDVKMVAA YVRELQRANG IN