Gene Dshi_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4029 
Symbol 
ID5714558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp95285 
End bp95902 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID641276941 
Productchromosome segregation and condensation protein ScpB 
Protein accessionYP_001542237 
Protein GI159046567 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGG ATCGCTCAGA CCCCGAACTG GATCGCGAGT TGCCCGATCT GCCGCCTGAG 
CTGCGCTGGC GGGAATGGAT ACGCCGGATC GAGGCTGTGC TGTTTGCCTC CGCCTCGCCA
GTCCCGCGCC AAGACCTCGC CCGCATCGTG GGGCAGGGCG CCTCAGTCGA TCTGCTGGTC
GAGGACCTTG CCGCCGATCT GGATGGGCGG GCCTTCGAGA TTGCCCAGGT CGCCGGCGGC
TGGATGTTCC GGACGCGGGC GGCCTATGCG CCCGCGATCC GGGCGGCGGC GGATATCGGG
GATCAGTTTC TGGATCTGAG CGAGTTCGAC ACCGCGGTCC TAGCCGCTAT CGCCTATCAC
CAGCCGATCA CGCGCGACGG GCTCAAGGAC ATCTTCGGCA AGGAGATCAG CCGCGAGCTT
ATCGGGCGCT TGCATGCGCA GGGTTTGATC GGGACCGGAC CGCGATCGCC GCGACGTGGC
GCGCCCTATA CATTTGTGAC GACGGAGCGG TTCTTGGCGG TGTTTGGGGT GGAGAGCCTG
CAGGACCTGC CCGATCGGGA GGGGCTGGAG GATGCGGGGC TGGGTCATCA AAAAGCTGAA
TCGGTCAGGG TGGATTGA
 
Protein sequence
MAKDRSDPEL DRELPDLPPE LRWREWIRRI EAVLFASASP VPRQDLARIV GQGASVDLLV 
EDLAADLDGR AFEIAQVAGG WMFRTRAAYA PAIRAAADIG DQFLDLSEFD TAVLAAIAYH
QPITRDGLKD IFGKEISREL IGRLHAQGLI GTGPRSPRRG APYTFVTTER FLAVFGVESL
QDLPDREGLE DAGLGHQKAE SVRVD