Gene Dshi_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3966 
Symbol 
ID5714495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp29536 
End bp30282 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content54% 
IMG OID641276879 
Producthypothetical protein 
Protein accessionYP_001542175 
Protein GI159046505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.283219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATT TACTCAAGAA GCTTCTCCCC TCGGTCGTAG TCACTTTAAC CGTGACAGGC 
CTTTCACTAC CGATGTCCGC CCGAGCGCAG ACATACCCGA TCGATTGCGC AATCCTCTTG 
TGTCTCTCTG GTGGCTGGCC CGCTTCTGTC CCTTGTGCTC GGGCTCGCGC CGAATTCATC 
CGGCGGATTA CGCCCTGGCC AGTGGAGCCG CCGCTCCAAA TTTGGCGCTG TCCAATGGGT 
GCGTCCTATG AGACCGCTCC AGCACCAAAC AGTGTAAACC GCATCTTTGA AGCGTTCTTA 
CAGAACAACC GCACTGAACC GCGACAGTCT TTTCCAGCGC AAGATGTCGC TACCCCGATT 
GAGGCTGCTT TGCGCACTCC AGATGCCCCT AATGACTTCG TACTCGCCGA TAGAGCCCTC 
CGGCTTGTTC AAGATCGCGC GGACATCGAT ATCAGCGGTC CTGAGTTCAA TTTCGTGCGG 
TCTATTCGCG TCTTTAATAT CCAGTACGCA AGACAATACC AGGCTGGAAG CGAAGGAGAT 
TGCGAACGTA GCGCCAACGT TGTTCTTGGC ACATATGGAA CGCAAGGTGA GTTCGCTTGG 
CAAAGAACTT CCATCACCGC CCTCCCCACC GCTCAAATTG GTCTCGAAAG ATGGGGGCAA 
AATTGCCCCG GCATCTATCA CCGCTCAGTA TTTGTCGACT GGCGTGACTA TGAAGGCAAC 
TACGGTTTTG AGCAGGTGAA CTACTAG
 
Protein sequence
MRHLLKKLLP SVVVTLTVTG LSLPMSARAQ TYPIDCAILL CLSGGWPASV PCARARAEFI 
RRITPWPVEP PLQIWRCPMG ASYETAPAPN SVNRIFEAFL QNNRTEPRQS FPAQDVATPI 
EAALRTPDAP NDFVLADRAL RLVQDRADID ISGPEFNFVR SIRVFNIQYA RQYQAGSEGD 
CERSANVVLG TYGTQGEFAW QRTSITALPT AQIGLERWGQ NCPGIYHRSV FVDWRDYEGN 
YGFEQVNY