Gene Dshi_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3957 
Symbol 
ID5714486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp23824 
End bp24294 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID641276870 
Producthypothetical protein 
Protein accessionYP_001542166 
Protein GI159046496 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAAGA AGTTGAGATA TACCAATGCA TTGGCCGTGC TTTTGACGGT TGCAGGGCTG 
TCGGCCCCCG CACTGGCCGG TTCGGAGGAT GTCGTGGTCG AGAATGCGTG GTCCCGCGCC
TCGATCGGCG TCAACAGGCC AGGTGCCGCC TATATGACCG TGCGCAACAC GGGTGAAGAC
GCCGTTACGC TGACCGGACT TGCGACACCG CTGGCAATGA TGCCCGAGAT CCATGAGTCG
AAAACCAACT CCGATGGCGT CAGTTCCATG GCGCCTGCAG GCGAGATCAC GATTGAGCCC
GGCCAAAGCG TGGCATTGGA GCCGGGCGGG TTGCACGCCA TGCTCATGAA GCTGCAAGAG
CCGATGACCG AAGGCGAGAA TTTCCCGCTG ACACTGACCT TCTCGGATGG CGGCAAGGTG
ACGGTCGAGG TCCCAATCCT CGGAATCGCC GCGCGTGGAC CGGAGGGCTG A
 
Protein sequence
MVKKLRYTNA LAVLLTVAGL SAPALAGSED VVVENAWSRA SIGVNRPGAA YMTVRNTGED 
AVTLTGLATP LAMMPEIHES KTNSDGVSSM APAGEITIEP GQSVALEPGG LHAMLMKLQE
PMTEGENFPL TLTFSDGGKV TVEVPILGIA ARGPEG