Gene Dshi_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3916 
Symbol 
ID5714445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp143909 
End bp144319 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content58% 
IMG OID641276829 
Producthypothetical protein 
Protein accessionYP_001542125 
Protein GI159046454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.80625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTA CATCATCGCC CGTCGCCAAC CGGCGTGATC GCGCAGCACA ATTTGCGCGC 
CTCGACCGGA TCGCCAACAT CTTCGATAGC CGGTTCAGGA TCGCGGGTAT CCGGTTTGGC
TGGGACAGTA TTCTTGGTCT TGTCCCTGGC ATAGGAGATC TCGTGACCGC TGCGCCCGGC
GTTTACATCA TCGGCCAATC CGCGCGCATG GGTGTGCGAC GTCGCGTTCT TGCGCGTATG
GCGGTGAACA CTGGTACTGA CATGATCATC GGAGGTATCC CGTTAGTCGG AGACATCTTC
GATGTCGGGT TCAAGGCGAA CCAGCGAAAT GTCCGGCTTT TGAAAAAGGA ACTGGATCGC
GATGGCACAT TCGACACGTG CGCAACGATG ACCCAAGCCC AGAGTAGCTG A
 
Protein sequence
MPSTSSPVAN RRDRAAQFAR LDRIANIFDS RFRIAGIRFG WDSILGLVPG IGDLVTAAPG 
VYIIGQSARM GVRRRVLARM AVNTGTDMII GGIPLVGDIF DVGFKANQRN VRLLKKELDR
DGTFDTCATM TQAQSS