| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3901 |
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| Symbol | |
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| ID | 5714430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 125343 |
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| End bp | 128468 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641276814 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001542110 |
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| Protein GI | 159046439 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.406058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTC TGATCCGTTG GTTTCTGACC AATCCCGTGG CCGCGAACCT CGCGATGGTG
GCTTTGGTCC TAGCGGGTCT CACCGCTGCA CTGAACCTGA CCGTTCGGAC CTTCCCTGAA
ATCAACACCG GCGTGATCAA TGTGACAGTG GTCTATCCCG GCGCCACCCC GGCAGAGGTC
GCCGACAGCA TCCTGGTGCC GATCGAAGAG CAGGTCACGG GCCTCGCCGG GATCCGCAGC
ATCGACGCCA CCGCCACTCG CGGGCGCGGG ACGGTTACCG TACAACTGAC ACGCGCCGCC
GATCCACGCA CGGTCAAGGA CGATGTCGAC AATGCCGTCG CGCGCATCAC GACCTTTCCC
GAAGCCGCGG AATCCCCCCG GGTGACCGAG GTGGAACCGA CCGAGGTAGC GGTCGAGCTG
GCTCTGTTCG GGACCGCGGA CCGCAAGACG CTCAAGGCGC TGGCAGAAAT CGTCCGCGCA
GACCTGACCG GCATGGACGG GATCAGCCAG GTCACGGTCA AAGGGGTCGC CCCCGACCAG
ATCGAGATCG CCGTGCCCCG CGCAACACTC GAAGCTTACG CCATCGGCCT GACCGCCCTT
GCCGACCGGA TCGCAGGGGC GAGCATCGAC CTGTCGGGCG GCGAGATCGA CACCGGTGCC
TCGACCGTGC AGGTCCGTGT CTCGGGCGAG GCGCAAACGG CAGACGCCCT GCGGGACACG
GTGGTCTTTA CCAGCGACAC GGGCGCGCGC GTGCGCTTGG GGCAGATCGC AACCATCCGC
GACGGCTTGA CCGAGGATGC CACGCTGGCC ACCATCGAGG GGCAGCCGGC GGTGTTCCTG
AGTGTCGAGC GCACGGGCAC CGAACAGGTT CTGCAAATCA CCGACGCCGT GACACGCTAT
ACCGAGCAAA CCCTGCCCGA GCGCCTGCCC CAAGGGGTCG AAGCCACGAT CTGGCGCAAC
AACGGTGCGC AGCTGCAGGG GCGTATCGAC CTTCTGGCCA AGAATGGTGG GATCGGCGCG
GTGCTGATCC TCATCGTGCT GGCGCTGTTT CTCGACCTGC GCATCGCAGC CTGGGTCGCG
GGCGGCGTGG CAATCACCTT TGCCGGGGCG TTCGTGCTGA TGCAGGCCTT CGGCGTTGCC
ATCAGCCAGC TGTCGCTCTT CGGTTTCATC CTCGCCCTCG GGATTGTGGT CGATGACGCC
ATCGTGGTGG GCGAGAACAC CTATTCCGAA TTGGAGGGCG AGGGCGATCC CGATCGCGCA
GCGGAGCGGG GCATCCTGAG CGTCTGGCGC GCCATCCTGT TTTCGGTCAG CACCACGGTG
CTTGCCTTCA CGCCGCTGTT GCTCCTGCCG GGGGCGTCGG GCTCCTTTAT CGGCCCCGTA
GCCACGGTGG TGATCTTCGT GCTGTTGCTG TCGCTGTTCG AAAGTTTCTT CATCCTGCCC
CGGCACCTGT CGAACATCCG GCTCACCCCA CCCCGCCGGT TTTCGCCGCG GCGTGTGACA
GACGGCCTGC GCAGGCGCGT GGATCGCGGG TTCCGGCGCT TCACCGACGG GCCGCTAGAC
CGTGCCGTGC GCTTTGCCAT CTGCCATCCG GTCGTCATCG TCGCCGGCTG CCTCGTCAGC
TTGATCCTGA CCGTCGGGCT GGTCCAGGGC GGCAAGGTCC GGTTCGAGTT CTTCCCCCGC
ATCGAAGGAA ACTTCGTGAC CGCCGAGTTG CGCATGCCCG ACGGCACCAG CGAGGATGCA
ACCTTGCAAC GGGCGCTCGA CATCGCGGGC GCCGCCCGCG ACGCCGCCGA CACCCTCGGG
GCGGACGTAC TGGAGCGCAC GGGCATCACG ATTGGCTTTT CCACCGGCGG CGGGCCTGGT
CAGGGCGGCA CAAGCTCTGG CAGCACCGCA AACATCTCGG CCCAACTGGC CGATGCCGCG
ACGCGCGATA TCACAGCCGC GGCCTTCACC GACGCCTGGC GCGAGCAGGT GGGCGAGGTG
GCGGGAGCGC GAGAATTGCT GTTCTCGTCC AGTCTTGTCG GCGTCGGTGC ACCGATCGCA
CTTAAGGTCG CCGCCGAGGA CGATAGCGCC CGGCAAGCAG CGGTGGACCG CATCACCCAA
GCCCTGCGCG GGCGCGAAGG CGTCCGTGAT CTGCGCGACG ACAGCGCCAG CACCGCGCAG
GAGCTGGTCA TCACCCCCCG CGCCGATGCC GCGACCTTCG GGATCAGCGA GACCGCCATC
GCGCGCGAGT TGCGCGCCGC TTTCTACGGG GTCACCATCG ACCAATTCGC CCGGAACCGC
GAAGAGGTCG ATATCCGCCT GCGCCTTGCG CTGGAAGATC GCGATGCCGT CGCCGACTTG
CGACGCCTGA CCATCCCCGG CCCCGAGGGC GATATCCCGC TCGAACGGCT GGTTGAGATC
GACCAGAAGC CCGCCGCAAC CTCGATCACC CGTGCAGACG GGCGCACAGT CACGACGATC
ATGGCGGATG TGAACACTGG CCTTACAACC GGCGGGGCCG AGACCGAATG GGTTCTTTCG
CAGATCGTGC CAGACCTGCG AGCGGATTTC CCCGGCCTCG AAGTCACCGC CGGCGGCGAG
CAGGAAGAGG CGGGCCGCTT TTCCAATTCG CTGACACAGA ATTTCGGACT GGCCCTGTTC
GGTATCTACG CGGTGCTGGC CCTTGCCTTC GGCAGTTACC TCCGGCCCCT GATTGTTCTG
CTGGTTCTGC CATTCGGTTT CGTGGGCGCG GTGTTGGCCC ATGCGGCCCT GGGCATGAAC
CTGACCTTGC TGAGCATGTT CGGCATCATC GGCCTGTCGG GCGTGGTGGT AAATGGGGCC
CTTCTGATCG TGGATTTCAT ACTCGCCGAG GAGGCCAGGG GCACCGACCC GAACGAGGCC
ATCCGGCGCG CCACGCTGCG GCGGTTCCGA CCCATCACGT TGACGACACT GACCACCTTT
CTCGGGGTCA CGCCGCTGAT CCTGGAAACA TCGGTGCAGG CGCAGTTCCT GATCCCCACG
GCCGTCTCGC TCGGCTTCGG CATCCTGTTC TCCTCCGTCC TTTTGATGCT GTTGGTCCCC
GCCTATGCCT CGCTTTTCGC CGCAGGCAGG GCCCGCATGC AGACCGGCAC CCCCCAACGC
ACATGA
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| Protein sequence | MARLIRWFLT NPVAANLAMV ALVLAGLTAA LNLTVRTFPE INTGVINVTV VYPGATPAEV
ADSILVPIEE QVTGLAGIRS IDATATRGRG TVTVQLTRAA DPRTVKDDVD NAVARITTFP
EAAESPRVTE VEPTEVAVEL ALFGTADRKT LKALAEIVRA DLTGMDGISQ VTVKGVAPDQ
IEIAVPRATL EAYAIGLTAL ADRIAGASID LSGGEIDTGA STVQVRVSGE AQTADALRDT
VVFTSDTGAR VRLGQIATIR DGLTEDATLA TIEGQPAVFL SVERTGTEQV LQITDAVTRY
TEQTLPERLP QGVEATIWRN NGAQLQGRID LLAKNGGIGA VLILIVLALF LDLRIAAWVA
GGVAITFAGA FVLMQAFGVA ISQLSLFGFI LALGIVVDDA IVVGENTYSE LEGEGDPDRA
AERGILSVWR AILFSVSTTV LAFTPLLLLP GASGSFIGPV ATVVIFVLLL SLFESFFILP
RHLSNIRLTP PRRFSPRRVT DGLRRRVDRG FRRFTDGPLD RAVRFAICHP VVIVAGCLVS
LILTVGLVQG GKVRFEFFPR IEGNFVTAEL RMPDGTSEDA TLQRALDIAG AARDAADTLG
ADVLERTGIT IGFSTGGGPG QGGTSSGSTA NISAQLADAA TRDITAAAFT DAWREQVGEV
AGARELLFSS SLVGVGAPIA LKVAAEDDSA RQAAVDRITQ ALRGREGVRD LRDDSASTAQ
ELVITPRADA ATFGISETAI ARELRAAFYG VTIDQFARNR EEVDIRLRLA LEDRDAVADL
RRLTIPGPEG DIPLERLVEI DQKPAATSIT RADGRTVTTI MADVNTGLTT GGAETEWVLS
QIVPDLRADF PGLEVTAGGE QEEAGRFSNS LTQNFGLALF GIYAVLALAF GSYLRPLIVL
LVLPFGFVGA VLAHAALGMN LTLLSMFGII GLSGVVVNGA LLIVDFILAE EARGTDPNEA
IRRATLRRFR PITLTTLTTF LGVTPLILET SVQAQFLIPT AVSLGFGILF SSVLLMLLVP
AYASLFAAGR ARMQTGTPQR T
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