Gene Dshi_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3890 
Symbol 
ID5714419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp113475 
End bp113804 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID641276803 
Producthypothetical protein 
Protein accessionYP_001542099 
Protein GI159046428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.183555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.188652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA ACCTCTTTCG CATCGCCACG CCCATTACGC TGTGGGCGAT CCATTTCATC 
GCCATCTATG CGCTGATCTC GGCCGCTTGC TCGCCGCGCG GGTTGCTGGG GCCGGATACC
ATGGCTGCCG TCGCGGCGCT GGTGACCGGT ACGATCGCGG TTGCGATCCT CGTGCTGCTG
ATCCTGTCCG GCCGCGGCAT GAGGCGCGTC GGGCCCGACG GTCCGGAATT GCCGCTCGCG
CAAGCGGCCT GGTGGTCGGC GCTGATCTCG TTCCTGGCGG TTCTTGCCAA CGTCTGGCCC
ATTCTGCGCG TGTCGGGCTG TACGGGCTAA
 
Protein sequence
MTTNLFRIAT PITLWAIHFI AIYALISAAC SPRGLLGPDT MAAVAALVTG TIAVAILVLL 
ILSGRGMRRV GPDGPELPLA QAAWWSALIS FLAVLANVWP ILRVSGCTG