| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3819 |
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| Symbol | paaB |
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| ID | 5714348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 27210 |
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| End bp | 27542 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641276734 |
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| Product | phenylacetate-CoA oxygenase subunit PaaB |
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| Protein accession | YP_001542030 |
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| Protein GI | 159046359 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
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| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.375319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.358605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACAC AGCCCGCCGC AGATCCCGAC GCGCCCGCCC CGCGCCCCCG CCGCCCCGAA
TGGCCCCTCT GGGAGGTGTT CATCCGTGGT CAGCACGGGC TGAGCCACCG CCATGTCGGC
AGCCTGCATG CCCCGGACGA AGAGATGGCG ATCAAGCATG CCCGCGACGT CTATACCCGC
CGCAACGAGG GCGTCAGCAT CTGGGTGGTG GAGGCGCGCC ACATCGCGGC CTCCAGCCCG
TCGGAGAAAG GGCCGCTCTA CGAACCCTCC GAGAGCAAGG TCTACCGGCA TCCGACCTTC
TTCGACATCC CCGACGACGT GGGGGCGATG TGA
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| Protein sequence | MSTQPAADPD APAPRPRRPE WPLWEVFIRG QHGLSHRHVG SLHAPDEEMA IKHARDVYTR
RNEGVSIWVV EARHIAASSP SEKGPLYEPS ESKVYRHPTF FDIPDDVGAM
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