Gene Dshi_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3809 
Symbol 
ID5714338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp18192 
End bp18461 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content63% 
IMG OID641276724 
Productmultiple resistance and pH regulation protein F 
Protein accessionYP_001542020 
Protein GI159046349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.332403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT ACGCTCTGCT CTTCGCCGCG GCCTGTTACG GCGCGGCGCT TCTGCTGGAT 
TTGTGGCGCA TCGCCGTGGG TCCGGATTCC GCCGACCGCA TCCTTGCCCT CGACACGATG
GTGATCAACG TGATCGCGCT CCTGGTGCTC TATGGCATCT GGCGCGGCAC GGCGATCTAT
TTCGAGGCCG CCATGCTGGT CGCCATGGTC GGGTTCGTGG CCACCGTCGC CTATTGCCGC
TTCGTGTTGC GCGGCGACAT CATCGAGTGA
 
Protein sequence
MIEYALLFAA ACYGAALLLD LWRIAVGPDS ADRILALDTM VINVIALLVL YGIWRGTAIY 
FEAAMLVAMV GFVATVAYCR FVLRGDIIE