Gene Dshi_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3798 
Symbol 
ID5714327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp6416 
End bp6958 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content70% 
IMG OID641276713 
ProductNADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 
Protein accessionYP_001542009 
Protein GI159046338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.317101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.343807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCATC TGCTTGCCGC CCTGCTGATC CTGCTCGCCC CCATGGCCCA GTCCGAGGCG 
CCGATGACCG ACGATTTCAC CGCCCAGCCC GAAACCCGCT GGCGCTTTTT CACCGATGGG
GTGATGGGCG GCGTCTCCGA GGGGCAGGTC GCGTTCCTGA CCGAGGCGGG CGTGCCCTTC
GCCCGGATGA CCGGGCAAGT CAGCACCGCC AATCGCGGCG GCTTCATCCA GATGCGCCGG
GATCTGCCGG AGGCCGCGCC CGAGACCGCC ACGGGCATCC GTCTGGTCGC GCGCGGCAAT
GACCAGCGCT ATTTCGTCCA CCTGCGCACG CGCGGATCGC GCCTGCCCTG GCAGTATTAC
CAGGCCGGGT TCGAGGTCGC TGGCGACTGG GCCGAGATCC GCCTGCCCTT TGCCGATTTC
GTGCCCTCGG GCCGGATGCT GCGCGCCCTG CCCCGGCCCG AAAGCCTGAC CTCCATCGCC
ATCGCCGCCT TCGGACGGGA CCATGCGGCC CGCGTCGATA TCCGCGAAAT CGGGGTGTAC
TAG
 
Protein sequence
MRHLLAALLI LLAPMAQSEA PMTDDFTAQP ETRWRFFTDG VMGGVSEGQV AFLTEAGVPF 
ARMTGQVSTA NRGGFIQMRR DLPEAAPETA TGIRLVARGN DQRYFVHLRT RGSRLPWQYY
QAGFEVAGDW AEIRLPFADF VPSGRMLRAL PRPESLTSIA IAAFGRDHAA RVDIREIGVY