Gene Dshi_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3787 
Symbol 
ID5714316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp185666 
End bp186397 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID641276702 
ProductDSBA oxidoreductase 
Protein accessionYP_001541998 
Protein GI159046326 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.117786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.763789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA GACAAGCCTT CACGACGGTC GCGATAGCTG CCTTGCTTCC GATACCGGCA 
CTCGCGGACG AACTGTCAGA GTCCCGGGTC AAGGAACTTG TGCTCGAGGC AATCCGCGAG
AACCCGGAGA TTGTCATGGA GGCCGTGGCG ATCCTCGAAC AAAGGCAGGC GCAAGCGCAG
GAGCTCAGTC AGGCCCAAGT TCTGAATGAC CAGCGCGATC TGATCGAGAA CGATCCGAAT
GCGCCGGTTC TCGGCAACCT GGAAGGGGAC GTCACTGTTG TGGAATTTTT CGACTACAAC
TGTCCCTATT GTCGGCGGGT CAAACCCGAG GTGCGGGCTT TGATCGAAGA CGATCCCAAC
ATTCGCCTCG TCTATCGTGA ATGGCCCATT CTCGGAGACG GATCGGTGTT TGCCGCGAAA
GCGGCCTTGG CAGCGCGCAA GCAGGACAAA TACGAAGAGT TTCACTGGGC AATGATGGGG
CTGGAAGGCC GCGCGGAAGA GGCCTCCGTG CTGCGCGTGG CCGAGGAGAT CGGCCTGGAT
ATCGCGCAGT TGCGCAAGGA CATGGAGGCC CCCGAGGTCG AAGAGCACAT TGCGACCTCC
ATGCAACTGA CCCAAGCTCT GGGCTTTAAC GGCACGCCGT CTTTCGTGAT CGGGGATGCG
CTGGTCCCGG GCTTCGTCGA AAAGGCGCAG CTTGCCGACT TGGTCGAGGA AGCCCGCAAA
GTCGAAGACT GA
 
Protein sequence
MRFRQAFTTV AIAALLPIPA LADELSESRV KELVLEAIRE NPEIVMEAVA ILEQRQAQAQ 
ELSQAQVLND QRDLIENDPN APVLGNLEGD VTVVEFFDYN CPYCRRVKPE VRALIEDDPN
IRLVYREWPI LGDGSVFAAK AALAARKQDK YEEFHWAMMG LEGRAEEASV LRVAEEIGLD
IAQLRKDMEA PEVEEHIATS MQLTQALGFN GTPSFVIGDA LVPGFVEKAQ LADLVEEARK
VED