| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3729 |
|---|
| Symbol | |
|---|
| ID | 5714258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009955 |
|---|
| Strand | - |
|---|
| Start bp | 136657 |
|---|
| End bp | 137175 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641276645 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541941 |
|---|
| Protein GI | 159046269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.442699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG CTAGCGTGCC CGCGCAAGCG CCCCTTGTCG TAAACGGATG GTCGATTTAT
GCGCATCCAC TCTTTCTGGA CCAGCTCGAA GGGCTGAACC TGGAGGTCGA GGCGCGTAAG
GCGCGCGATT CCAAGACCTG GCGCAAGAAG AACTGCTCGA AGCGGCTGGC AGCCATCTTC
AAGCTGGTGA CCAAGGCGAT ACCGGCGGAT CCGGGTGCCG CGGCATTCCG GCAAGGCGGC
ACACTCGGCG ATCACCGCAA GCACTGGTTC CGAGCGAAAT TCTTCCAGCA GTATCGGTTG
TTCTACCGCT TCAACAGCGA TGCGAAGGTC ATCGTGGTGG CCTGGGTGAA CGACGACAAG
ACCCTGCGCG CCTATGGCAG CAAGACGGAT GCCTACGCGA CGTTCAAAGG GATGCTGAAA
GATGGCAACC CACCTGACAA TTTCGACGCG CTGTTGAAAG AAGCTGCAGC GGCGGACAAG
CGGTTCGAGA CGTCCCTTGA AGCGGTGCCC GATCGGTAA
|
|---|
| Protein sequence | MSSASVPAQA PLVVNGWSIY AHPLFLDQLE GLNLEVEARK ARDSKTWRKK NCSKRLAAIF
KLVTKAIPAD PGAAAFRQGG TLGDHRKHWF RAKFFQQYRL FYRFNSDAKV IVVAWVNDDK
TLRAYGSKTD AYATFKGMLK DGNPPDNFDA LLKEAAAADK RFETSLEAVP DR
|
|---|
| |