Gene Dshi_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3721 
Symbol 
ID5714250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp128417 
End bp128926 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID641276637 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001541933 
Protein GI159046261 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.402423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAT TGACCGCCAC CGAAAGGCAC CCCGTCCGCT TTACCCTGAA TGGCAAGCCC 
GCCGAGGGCA CAGCCCACCC GCGCATGTTG CTCAGCGATT TCTTGCGTGG CGTCCAGGGT
GCGACAGGCA CCCATATCGG CTGCGAACAT GGTGTCTGCG GCGCCTGCAC GGTTCGGATC
GACGGCGCGA TGGCACGCAG TTGCCTGACA TTCGCGGTCC AGATCGAAGG CGCCGAGATC
GACACGGTCG AGGCCCTGGC CCCTGCCCCC GCCAGATTGT CCATCCTGCA GGACGCCTTT
CGCAAACATC ACGCGCTGCA ATGCGGCTTT TGCACCCCCG GCATCCTGAT GTCGCTCGAC
ACGTTGCTCG CAACCGAACC GCGGGCCGAC GCGGGACGCA TCCGCGACGT TCTGTCGGGG
CATCTGTGCC GCTGTACCGG ATACCAACCG ATCGTCGCTG CCGCACTGGA CGCAGCACAA
ACCCTCAGGG AGGAGACAGA CAATGCTTGA
 
Protein sequence
MRRLTATERH PVRFTLNGKP AEGTAHPRML LSDFLRGVQG ATGTHIGCEH GVCGACTVRI 
DGAMARSCLT FAVQIEGAEI DTVEALAPAP ARLSILQDAF RKHHALQCGF CTPGILMSLD
TLLATEPRAD AGRIRDVLSG HLCRCTGYQP IVAAALDAAQ TLREETDNA