| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3674 |
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| Symbol | |
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| ID | 5714204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 75225 |
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| End bp | 77591 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641276592 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001541888 |
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| Protein GI | 159046216 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.301148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCACGG ATTTGACCGA TGCGCTCAAT CCTGTGGCCG AGGCCATCCT TGGCCTGCCG
ATCAGATCCA ACGTCTTTCT TTATGTCTTT CTACCGACGC TTCTATTTCA GGCGACATTG
GGCATGAACT TGCGCCGGAT GCTTGATGAC TGGGTTCCAA TCATGGTGTT GGCGGTTGTC
GCAGTGGTCG TTGCCACACT CAGCGTCGGT TATGCGTTGT CGTGGGCCAC TACCCTACCT
TTGGCCGCAT GCCTTTTGAT AGGTGCCATT GTATCAACGA CCGACCCGTC TGCTGTTGTC
TCGATCTTCC GCTCAATTTC GGCACCCCGC AGGCTTGCGC GGATCATTGA AGGCGAAAGC
CTTTTGAACG ATGCTGCCGC TATCGCACTT TTTGGGCTGT TCATGGGGTT TGTTATGCTG
GGTGTACCCA ACCCGGAATT GAGCGATGCT CTGGCCCGCT TTCCGGTTTT GATCGCCGGA
GGCGCACTCA CTGGCTGGCT GGCCGCGCGC GTTGCGATCT GGATAATGGC GTCTTTTCAC
GCGCATGAAC TTGCACTTAT TTTGGTATCG GTCGCTCTCC CGTATCTCGC CTATATTGGC
GCGGAACAAA GTATCGGCGC GTCTGGCGTG ATTGCTGTTG TCGCTGCAGG GTTGACCTTG
AACTTGAGTG GTCCCGGACG TCTTCCACCC CAAGCCTGGG CCAACCTGCG CGAAGTCTGG
GATCTGCTGG CCCACTGGGC TGGTGCATTG ATCTTCATTC TTGCCGCGCT CCTTATTCCG
CGACTACTGG AAGATGTCAG AGTAAGCGAT TTCATTCTAA TCGGTGTGGT TATTGTTGCC
GCGATTGCGG CACGGGCCGT AATTTTGTTC GGACTTCTGC CGTTACTGGC GATCTTGCGA
CTCTCACCGC CAGTTGAACG TCCCTACCGT GTGGCAATTC TTTGGGGCGG GCTGCGTGGC
GCGGTCACAC TTGCGCTTGC GCTGGCCGTC ACGGAAAGTT TCCGTGTTCC TGTCGAGGTC
AAACGCCTCG TCGGTATCCT TGCAACTGGT TTTACGCTTT TCACGCTGAT CGTGCAGGGC
ACCACGCTGC GGTCCGTTAT TGGCTGGATG GGTCTGGACC GCCTGTCACC TATCGACGAG
GCGATGTCGC GGCAGGTGGT TGCGGTAGCC CTCCAAACCG TGCGCGAAGA TATTGCACGC
ACCACCGAGG ATTACGCACT CACGCATGAT ATCGTGCGCG CCGAAGCAAA GGTTTTCGGC
GAAAGACTGG AAGCGGCGGT CAGAACAGCC GAAGACAGCG ATGAAATCCT TGATCGCGAC
CGGATCACTT TGGGGCTTAT CGCCCTTGCA GGGTTCGAGC GTGACACAAT CCTCGCGCGG
GTCAGGGAAC GGACAATTTC GGCGCGAATG GCTGAACAGA TCCTGTCCGA CGCTGATCGG
CTTATCGAGG CTGCACGGGC AGGCGGGCGC AGCGGATATC AGCAGGCCGC CCGCCGGTCG
GTTGCCTATG GTCGCGCGTT CAGGACGGTT GTGGCGTTGC ACAACAGATT GGGCCTTTCT
GCGCCTTTGG TACGCATGAC GTCTGATCGC TTCGAGCTGT TGCTGTCGCA AAGGCTGATC
ATGCGCGATC TGGATGCATT CATCGACGGA CGCATTCGTC GCATTCACGG CAGACGTGTG
GCAGACCTCC TTCACGAACT CCTCGCGCGG CGGATCGAAA CAGTTGAAAC AGCGCTGGAG
GGCCTGAGAT TGCAGTATCC GGGCTATGCC GAGGAACTGG AACGGCGTTT CATCCGGCGC
ACGTCGCTTC GACTGGAAGA GCGGGAATAT GCAGCCATGC GAGAAGACGG CCTAATCGGA
GCTGAGGTTT ATGCAACCTT GATGCAAGGC CTCGCGGTAC GGCGAACAGC CGCAGAGGGG
CGGCCGACAC TTGATATCGC GTTGAAGCGG AAAGAGCTCA TCAAGCTGTT TCCCCTGTTT
GCTGACCTCG ATGAAGCCGC CCTCAGAAAA CTGGGTCGGG CATTGCGTAC CCAATACGTC
AACGCAGGCA ATGTCATTGT TCATAAGAAT AACGAGGTGA AGAACGTCTA CTTCATCGCC
TCGGGCGCTG TTGAGCTTGA AAGTTTGGGG CAATCGTGGC GTTTGGGCAG GGGAGATATG
TTTGGACAAG TCGCCGCTTT GACAAGAAAT GCCCGTCGTG CAGAAGTCCG GGCCATCGCG
CCCTCCACGC TGCTAGTGTT GGATGTTGCC CGCTTTCGGC AAATGCTGGC GCAAAGCGCC
GTTTTGCAGA ACGCGGTGCG CGCAAGCGCC GAACAACGCG GAATTGACCC GTTCCTTCTA
CTCGGGGAAG TGCTGGAAGA AAAATAG
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| Protein sequence | MRTDLTDALN PVAEAILGLP IRSNVFLYVF LPTLLFQATL GMNLRRMLDD WVPIMVLAVV
AVVVATLSVG YALSWATTLP LAACLLIGAI VSTTDPSAVV SIFRSISAPR RLARIIEGES
LLNDAAAIAL FGLFMGFVML GVPNPELSDA LARFPVLIAG GALTGWLAAR VAIWIMASFH
AHELALILVS VALPYLAYIG AEQSIGASGV IAVVAAGLTL NLSGPGRLPP QAWANLREVW
DLLAHWAGAL IFILAALLIP RLLEDVRVSD FILIGVVIVA AIAARAVILF GLLPLLAILR
LSPPVERPYR VAILWGGLRG AVTLALALAV TESFRVPVEV KRLVGILATG FTLFTLIVQG
TTLRSVIGWM GLDRLSPIDE AMSRQVVAVA LQTVREDIAR TTEDYALTHD IVRAEAKVFG
ERLEAAVRTA EDSDEILDRD RITLGLIALA GFERDTILAR VRERTISARM AEQILSDADR
LIEAARAGGR SGYQQAARRS VAYGRAFRTV VALHNRLGLS APLVRMTSDR FELLLSQRLI
MRDLDAFIDG RIRRIHGRRV ADLLHELLAR RIETVETALE GLRLQYPGYA EELERRFIRR
TSLRLEEREY AAMREDGLIG AEVYATLMQG LAVRRTAAEG RPTLDIALKR KELIKLFPLF
ADLDEAALRK LGRALRTQYV NAGNVIVHKN NEVKNVYFIA SGAVELESLG QSWRLGRGDM
FGQVAALTRN ARRAEVRAIA PSTLLVLDVA RFRQMLAQSA VLQNAVRASA EQRGIDPFLL
LGEVLEEK
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