| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3645 |
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| Symbol | |
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| ID | 5714175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 44855 |
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| End bp | 45511 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641276563 |
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| Product | VirB8 family protein |
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| Protein accession | YP_001541859 |
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| Protein GI | 159046187 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0668357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCGA GTGAACAAGA AATCATCGAG GAAGAACTGG TCTACGGTGC CCTGCGCCGC
GAACGGCTCT GGCAACGCCT TGGCCTGATG GGCCTTGTCT TCGGTATCAT CGGCTGTCTG
AGTGCCGCGG CTGTCTCGAT CCTCGATGTC GATCCGCCAC CTGTGGTCGT CCCCTATGAT
CCCGCCACTG GTTTTGCCCT GCCCGAGGCG TCCGTTGGGG CCACATCCGT CACCGCCAAC
CAGGCGATCA TCGAGGCAGA GGTGTTCCGC TATGTGACCG ACCGGGAGGT CTATAACCAG
CTCGACAACG ATCTGCGCAT CCGCAGCGTC CTGCGCCGCT CGGACGGAGC TGCCGAGAGC
GGGCTGCGCC AGATCTGGAA CAGCGCCAAC GAGAATTACC CGCCGACGGT TTATGGCCCC
AATGCCCGGC TCGACGTGGA AATCCTCAGC ATCAACCGGA TCGGAACCAA CCGCGCGACG
GTCCGCCTGC GCAAGCGCCT GACGTCCATT AACGGCACCC AGACCGGGCT CTTCACTGCG
ACGCTTCTCT TCGAGTTCCG CCCGGAGACC CGCCGGTCCA TCGACGAGGT CTGGACCAAC
CCGTTTGGGT TCACCGTGCT CGAATATTCC ATCCGCTCCG ACAGATTGGA GAATTAG
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| Protein sequence | MVASEQEIIE EELVYGALRR ERLWQRLGLM GLVFGIIGCL SAAAVSILDV DPPPVVVPYD
PATGFALPEA SVGATSVTAN QAIIEAEVFR YVTDREVYNQ LDNDLRIRSV LRRSDGAAES
GLRQIWNSAN ENYPPTVYGP NARLDVEILS INRIGTNRAT VRLRKRLTSI NGTQTGLFTA
TLLFEFRPET RRSIDEVWTN PFGFTVLEYS IRSDRLEN
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