Gene Dshi_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3616 
Symbol 
ID5714146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp20585 
End bp21043 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID641276534 
Producthypothetical protein 
Protein accessionYP_001541830 
Protein GI159046158 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0453249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT TTACTCCCGC CCTTGCCATC GCATTTGCCT TGCTTCCTGC GGCGCAGGCC 
GTCGCAGAGG CGATTCAGAT CGACGTCCGG AAGACAAACG GCTGCGGCTG TTGCCTGTCC
TGGATGAAGC ACCTCGAGGA GAATGGCTTC GCGCCGATGG GCGAGGACAT GTTCGGAGGA
TCTCTTGTGC GCTTCAAACT CGACAATGGC GTGCCGCAGC GCATGGTCTC CTGCCATACG
GCTTTGGTCG ACGGCTATGT GATCGAGGGC CACGTGCCGG CGGCTGACAT CCAACGCCTG
CTGGAGGACC GGCCAGACGC GGTAGGCCTG GCGGTGCCGG GAATGCCCTA CGGGTCGCCC
GGCATGGGAC CGGAGGACGA CCGGGAGGCT TACGATGTCT TCCTGATCCA CGAAGACGGA
TCGACCGAGG TCTACACCAG CTACTCGGCT CCTGACTGA
 
Protein sequence
MKRFTPALAI AFALLPAAQA VAEAIQIDVR KTNGCGCCLS WMKHLEENGF APMGEDMFGG 
SLVRFKLDNG VPQRMVSCHT ALVDGYVIEG HVPAADIQRL LEDRPDAVGL AVPGMPYGSP
GMGPEDDREA YDVFLIHEDG STEVYTSYSA PD