Gene Dshi_3554 details

Gene Information

• Locus tag: Dshi_3554
• Symbol: adk1
• ID: 5713785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 3738878
• End bp: 3739567
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641269483
• Product: adenylate kinase
• Protein accession: YP_001534888
• Protein GI: 159046094
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0563] Adenylate kinase and related kinases
• TIGRFAM ID: [TIGR01351] adenylate kinases

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATGGCG CGACACTGAC ACAGACCAAG CCGGTGAACG TGATCCTGCT GGGCCCGCCG 
GGTGCCGGCA AGGGTACCCA GGCGCGAATG CTCGAAGAGA AGTTCGGCCT GATCCAGCTC 
AGCACCGGTG ATCTGCTGCG GGCAGCCGTG GCGGCCGGCA CCGAGGCCGG GCGCGAAGCC 
AAGGCGGTAA TGGAAGCCGG GGCGCTGGTG TCCGACGAGA TCGTTCTGGC GATCCTGAAG 
GATCGGCTGG CCGAGGGGGA CGTGAAGGCC GGTGTGATCC TCGACGGGTT CCCGCGCACC 
ACGGCCCAGG CAGAGGCGCT CGATGCGCTG CTGTCCGACG CGGGCCAGGG CATCGATGCG 
GCAATTGCGC TCGTCGTCGA CGACGAGGCG ATGGTCGGCC GGATCTCCGG CCGCTTCACC 
TGTGGCGGCT GCGGCGAAGG TTACCATGAT ACTTTCAAGG TCCCCGCAAA ATCAGGGACT 
TGCGATAAGT GTGGCAGCAC GGATATGACA CGTCGGGCTG ACGACAATGC CGACACGGTG 
CGCGAGCGGC TCAAGGCCTA TCACGTGCAG ACGGCCCCCC TGATCGGATA CTACGAGGCA 
CAAGGCGTGC TGAGGAAAGT GGACGCGATG GGAGAGATTG GGATAGTCGC AGAGCAACTG 
GCAGGAATTG TCGGGTCCGC GACATCCTGA 

 

Protein sequence

MDGATLTQTK PVNVILLGPP GAGKGTQARM LEEKFGLIQL STGDLLRAAV AAGTEAGREA 
KAVMEAGALV SDEIVLAILK DRLAEGDVKA GVILDGFPRT TAQAEALDAL LSDAGQGIDA 
AIALVVDDEA MVGRISGRFT CGGCGEGYHD TFKVPAKSGT CDKCGSTDMT RRADDNADTV 
RERLKAYHVQ TAPLIGYYEA QGVLRKVDAM GEIGIVAEQL AGIVGSATS