| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3540 |
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| Symbol | puhA |
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| ID | 5713771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3723698 |
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| End bp | 3724468 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269469 |
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| Product | reaction center protein H chain |
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| Protein accession | YP_001534874 |
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| Protein GI | 159046080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01150] photosynthetic reaction center, subunit H, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA CATTCTTCGG CAATTTCGAC CTCGCCAGCC TCTCGCTCTG GCTGTTCTAC
GGCTTCTTCG CGCTGCTGAT CTACTATCTG CAGACCGAGA ACATGCGCGA GGGCTACCCC
CTCGAGGATG ACGACGGCAA CACCGCCGCC AACCAGGGGC CGTTCCCGCT CCCGAAGGAG
AAAACCTTCA AGCTGCAACA TGGCCGTGGC GAGCTGACAC TGCCGGGCGA AGACGTGCAG
CGGCGCGACA ATCTCGCCCT GCGCAAGACG GCCCATGGCA ACGGCTTCCC GATGGAACCC
ACGGGCGATC CCATGCTCGA CGGGGTGGGC CCGGCCAGCT GGTCCAAGCG GCGCGACGTG
CCGGAACTGG ACGCCCACGG TCACCCCAAG ATCGTGCCCA TGTCGGCCGC CGAAGGCTTC
GGCGTGTCCG CCGGGACCGA CCCGCGCGGC CTGCCGGTCA TGGCGGGGGA CGGCGAGATC
GTCGGCCTGG TCTCCGACAT GTGGATCGAC GAAGCCGAGC AGCTCGTCCG CTACCTCGAG
ATCGAGCTCG ACCCCGAATG GGGCGACGGC AAGCGGCTCG TGCAGCGTGA AATGGTGCGG
ATCAAGTCCG ACCGGGTGAA GGTCCGCTCG ATCTACGGCA AGCACTTCAA GAACGTGCCG
AAAACCAAGT CCCCGAACCA GGTCACCCTG CTCGAGGAAG ACAAGATCAT GGCCTACTAC
GCGGGCGGCA CCCTTTATGC CGACGAGTCC CGCCTTGAGC CGCAATTGTA A
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| Protein sequence | MEETFFGNFD LASLSLWLFY GFFALLIYYL QTENMREGYP LEDDDGNTAA NQGPFPLPKE
KTFKLQHGRG ELTLPGEDVQ RRDNLALRKT AHGNGFPMEP TGDPMLDGVG PASWSKRRDV
PELDAHGHPK IVPMSAAEGF GVSAGTDPRG LPVMAGDGEI VGLVSDMWID EAEQLVRYLE
IELDPEWGDG KRLVQREMVR IKSDRVKVRS IYGKHFKNVP KTKSPNQVTL LEEDKIMAYY
AGGTLYADES RLEPQL
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