Gene Dshi_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3517 
SymbolbchX 
ID5713748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3696712 
End bp3697719 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID641269446 
Productbacteriachlorophyllide reductase iron protein subunit X 
Protein accessionYP_001534851 
Protein GI159046057 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR02016] chlorophyllide reductase iron protein subunit X 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.326677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCG ATGTCCCGAA CCTGAAATCC GACTATGACC AGCGCCTTCG TGACGAGGCC 
GCCGAAGAAC CCACACTGGA AGTCCCCCAG GGCGAGCCGA CCAAGAAGAC CCAGATCATC
GCGATCTACG GCAAGGGCGG CATCGGCAAG AGCTTCACGC TCGCCAATCT CAGCCACATG
ATGGCCGAAC AGGGCAAGCG CGTGCTGCTC ATCGGCTGCG ACCCGAAATC CGACACGACC
TCGCTGCTGT TCGGCGGCAA GGCGTGCCCG ACAATCATCG AGACCTCGAC CCAGAAGAAA
CTCGCCGGCG AGGAAGTCGC CATCGGCGAT GTCTGCTTCA AGCGCGGCGG CGTCTTCGCA
ATGGAACTCG GCGGGCCCGA GGTGGGTCGC GGCTGCGGCG GACGGGGGAT CATCCATGGC
TTTGAACTGC TGGAAAAACT CGGGTTCCAC GATTGGGACT TTGACTATGT GCTCCTGGAT
TTCCTCGGCG ATGTGGTCTG CGGCGGTTTC GGCCTGCCTA TCGCTCGGGA TATGGCCCAG
AAAGTTATAC TCGTAGCCTC CAACGACCTG CAGTCGCTCT ATGTCGCCAA CAACGTCTGC
TCGGCGGTGG AATACTTCCG CAAGCTCGGC GGAAATGTCG GTGTCGCGGG CCTCGTGATC
AACAAGGATG ACGGCACCGG GGAGGCCGCG GCCTTCGCCA AATCCGTCGA CATCCCGATC
CTCGCGGCGA TCCCGCAGAA CGACGACCTG CGCAAGAAAT CCGCGAATTA CCAGATCGTC
GGCACCGCCC AGAGCGAATG GGGCGAGCTC TTCGCCGCGC TGGGCGACAA TGTCGCCGAA
GCCCCGCCCA TGCGCCCGGC GGCCCTCAAT CAGGACCAGC TGCTCGCGCT CTTCGACAGC
AAGGACACCG GCGGCGACGT GGTGCTGGAA CCGGCCACCA TGGAAGACAT GCGCGGCAAG
AACGCCAAGC CCATCGAGTC CCTCGAAGTG GTCTATGACG ATGTCTGA
 
Protein sequence
MTLDVPNLKS DYDQRLRDEA AEEPTLEVPQ GEPTKKTQII AIYGKGGIGK SFTLANLSHM 
MAEQGKRVLL IGCDPKSDTT SLLFGGKACP TIIETSTQKK LAGEEVAIGD VCFKRGGVFA
MELGGPEVGR GCGGRGIIHG FELLEKLGFH DWDFDYVLLD FLGDVVCGGF GLPIARDMAQ
KVILVASNDL QSLYVANNVC SAVEYFRKLG GNVGVAGLVI NKDDGTGEAA AFAKSVDIPI
LAAIPQNDDL RKKSANYQIV GTAQSEWGEL FAALGDNVAE APPMRPAALN QDQLLALFDS
KDTGGDVVLE PATMEDMRGK NAKPIESLEV VYDDV