| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3295 |
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| Symbol | ispA |
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| ID | 5712352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3461924 |
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| End bp | 3462799 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269223 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_001534629 |
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| Protein GI | 159045835 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGGGT TTGCAGCGGC CCAAGCCGAC GGGGCCACAC GGATTGCCGC CTGTCTTGAC
GATCTGATCG GAGCTCAGCC CGAGAGCGTT ATCCGCGACG GGATGGCCTA TGCCACCCGG
GGCGGCAAGC GGTTGCGCGG AGTGCTGGTG CTGGAGACGG CCTGGCTGCA CGGTGTGGCG
CCGGAGCGGG CGGTTTACGC CGCCGCCGCC ATCGAGTGCC TGCATGCCTA TTCCCTGGTC
CATGACGACC TGCCTGCGAT GGATGATGAC GATCTGCGCC GGGGTCAGCC CACGGTGCAC
GTCAAATGGG ACGAGGCGAG CGCGATCCTC GTGGGCGATG CCTTGCAGAC CCTGGCCTTC
GAGGCGCTGA GCGATCCGCG CATGACCGAC GATCCGGCCG TGGCGCTGGC GCTGGTGCGG
TCCCTCGCAC AGGCCTCCGG GGCGGCGGGC ATGGTGCTGG GCCAGGCGCT GGACATCGCG
GCCGAGACTG CGGCGGCCCC CCTGAGCCTC GACGAGATCA CCCGGTTGCA GGCGGGCAAG
ACCGGCGCGC TGATCCGCTG GTCGGCGGAG GCGGGCGCGC TGCTGGCCCG GGCGGACCCG
GCCCCCCTGC GGCGGTATGC CGAGGCCATC GGCCTTGCCT TCCAGATCGC GGATGACATC
TTGGACGTCA CGGGCGATGC TGAAAAAGCG GGCAAACGGC TACAGAAGGA TGCCGAGGCG
GGCAAGGCGA CCTTCGTGTC GCTCTTGGGG CTGGAGGCGG CGCGGGCGCG GGCGGCGGCG
CTGGTGGCAG AGGCCGAGGC GGCGTTGCAG CCCTATGGCG CGGAGGCAGA GACCTTGTGC
GAGCTGGCGC GTTTCGTTAT CGCACGCGAC ACCTGA
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| Protein sequence | MSGFAAAQAD GATRIAACLD DLIGAQPESV IRDGMAYATR GGKRLRGVLV LETAWLHGVA
PERAVYAAAA IECLHAYSLV HDDLPAMDDD DLRRGQPTVH VKWDEASAIL VGDALQTLAF
EALSDPRMTD DPAVALALVR SLAQASGAAG MVLGQALDIA AETAAAPLSL DEITRLQAGK
TGALIRWSAE AGALLARADP APLRRYAEAI GLAFQIADDI LDVTGDAEKA GKRLQKDAEA
GKATFVSLLG LEAARARAAA LVAEAEAALQ PYGAEAETLC ELARFVIARD T
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