Gene Dshi_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3266 
SymbolfliN 
ID5712323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3431658 
End bp3431927 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content67% 
IMG OID641269194 
Productflagellar motor switch protein FliN 
Protein accessionYP_001534600 
Protein GI159045806 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.994662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC CGAGCCCGCG TCCCGAAAGC CCGCTGGTGG GCGTACCGAT CGCCCTGAGC 
GTGTCCGTGG GACAGGCCCA TCCCACCGTG CGAGAGCTGC TCGCCTTGGA AAAGGACGCG
GTTCTGTTGC TCGACAAGCG GATCGAGGAC CCGGTGGAGC TCTATGTCGG CACCCACCTG
ATCGCCCGCG GCGTGCTGGA GGAAGATGCG GACAGCCACC GCCTGTCGGT GCGGCTGACC
GAGGTGATCT CGCCCGAGCG CGTCGTCTGA
 
Protein sequence
MDNPSPRPES PLVGVPIALS VSVGQAHPTV RELLALEKDA VLLLDKRIED PVELYVGTHL 
IARGVLEEDA DSHRLSVRLT EVISPERVV