| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3257 |
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| Symbol | fliR |
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| ID | 5712314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3422117 |
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| End bp | 3422890 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269185 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001534591 |
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| Protein GI | 159045797 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTGGA CCCTGGCAGA AATCGCCGGC GATGTGTTTC CGGTTTTCAT CCTGGCACTT
CTGCGGATCG GCGCGGCCAT GGCCTTCCTG CCCGCCTTCG GCGAGCGCGC GGTCCCGCTC
CGCATCAAGC TGGTGCTCAC CCTCGCGCTC ACGGCGCTTG TCCTGCCCAC GCTGCTGGCC
ACCGGCGCAC CGCCGCTGGA GCGCCCGGCG GACTGGGTCC TGGCGGGCGG CGCCGAGGTC
GTGAGCGGCC TGTTTCTCGG CTTCACCTTC CGGCTGATGG TCTTCGCGCT GCAGGTCGCC
GGCACGATCG CGGCCCAGTC CACCTCGCTT GCCCAGGTTT TCGGCGGTGC GGTGACACCG
GATCCGCAAC CGGCGCTGGG CAATATCTTC CTGATGGCCG GACTGGCGCT CGCCGCGCTT
TCGGGGCTCC ACGTCCACCT GACCGAGGCC TTCCTTCTGT CCTTCCTGCT GCTGCCGGTC
GGCAATTTTC CCAATTCCGA CATCATCAGC GCCTGGGCCA TCGCCGATGT CAGCCGGATG
TTCGTCGTCG GCTTCACGCT CTCGGCTCCG TTCGTGGCGG CCGCGATGCT CTACAACCTT
GCGCTCGGGG CGATCAATCG GGCCATGCCG CAACTGATGG TGGCCTTCGT CGGCGCCCCG
GCCCTGACCC TGGGCGGCCT GGCTCTCGCC GCCCTCAGCG TCCCCTTCCT GCTGACCCAC
TGGTGGTACC TTTTCGAGGC GTCAATCTTC GCGCCCTTCG GACCCGTGAG ATGA
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| Protein sequence | MTWTLAEIAG DVFPVFILAL LRIGAAMAFL PAFGERAVPL RIKLVLTLAL TALVLPTLLA
TGAPPLERPA DWVLAGGAEV VSGLFLGFTF RLMVFALQVA GTIAAQSTSL AQVFGGAVTP
DPQPALGNIF LMAGLALAAL SGLHVHLTEA FLLSFLLLPV GNFPNSDIIS AWAIADVSRM
FVVGFTLSAP FVAAAMLYNL ALGAINRAMP QLMVAFVGAP ALTLGGLALA ALSVPFLLTH
WWYLFEASIF APFGPVR
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