| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3143 |
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| Symbol | ugpA3 |
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| ID | 5712199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3309722 |
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| End bp | 3310594 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269070 |
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| Product | sugar ABC transporter |
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| Protein accession | YP_001534477 |
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| Protein GI | 159045683 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.382012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACA ACACCCTGAA ATACTTTCTC GTGCTGCCGG CGGTGGTGGT CGTGTTCGCC
ACGGCGATCT GGCCCCTGAT CGAAGCCGCG CGCATGTCCT TCACCGTGGG CCGCCTCAAC
CGCCCCGGCT CGCTGGAGCA ATACATCGGC TGGGAGAACT ACGCCTGGGC CTTCTTCGAA
GAGCCCGCCT TCTGGAATTC CGTCTATGTC ACCGCGCTTT ACACCGTGGT GACCGTGGGG
CTGACCACGT TGCTGGCGCT GGGCCTCGCG CTCCTGCTGG CGCCCGGCGG GCGGCTGCGG
GTCTCGGCCC AGACCCTGCT GATCCTGCCC TTCGCCATGA GCCCGGCGCT GATCGGCGTC
TCCTTCCGGT TCATGTTCAA CCCCGAATTC GGCCTCTTCG ATGCGTTCTT CGGCGTGATG
ATCCCGCCGC TGGCGGATGT CAGCTGGCTG GCCGACCCGA CGCTCGCCTT CGCGGTGGTG
GTGATGGCCG ATGTCTGGGG CTGGATCCCC TTCCTGACGC TCGTGCTGAT CGGCGGTCTG
GCCAGCGTGC CCCGCGACAC GATCGAGGCC GCCCAGGTCG ACGGCGCCAG CAGCTGGCGG
GTCTTTCGCG ACGTGACCCT GCCGCAACTC GGCCCGGTCC TGGCCGTGGT CATCATCCTG
AAATCCATCT TCAGCCTGAA AACTTTCGAC CAGGTCTTCA TGCTGACCAA TGGCGGGCCG
GGCACCGCTA CCCAGACGCT CAGCCATTAC ATCTACTTCA ACGGCATGAA ATACGGGCAG
ATCGGCTATT CGGCCTCGGT CGCCTGGCTG ATGGTGATCC CGATGATCTT CCTCACCTAC
GCCTATGCCA AGTTCGTCTT CCGGAAGAAC TGA
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| Protein sequence | MRDNTLKYFL VLPAVVVVFA TAIWPLIEAA RMSFTVGRLN RPGSLEQYIG WENYAWAFFE
EPAFWNSVYV TALYTVVTVG LTTLLALGLA LLLAPGGRLR VSAQTLLILP FAMSPALIGV
SFRFMFNPEF GLFDAFFGVM IPPLADVSWL ADPTLAFAVV VMADVWGWIP FLTLVLIGGL
ASVPRDTIEA AQVDGASSWR VFRDVTLPQL GPVLAVVIIL KSIFSLKTFD QVFMLTNGGP
GTATQTLSHY IYFNGMKYGQ IGYSASVAWL MVIPMIFLTY AYAKFVFRKN
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