Gene Dshi_3137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3137 
Symbol 
ID5710989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3304170 
End bp3304880 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID641269064 
Producthypothetical protein 
Protein accessionYP_001534471 
Protein GI159045677 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA GACCGATCCC TCCCACGTTG CTTGACCGCC TCCGGGCCGT GGACACCCCG 
ACCGTTTGCA ACGCCATCGA GGTGGTGCAG GGCGGCCGCG GCTTTGCCCG CCTGACGCGC
GGCACGATGC AGCATTCCCG CCCCGGCATG CCGCCCATGG TGGGCCGCGC CCGCACCGCC
AGGATCGCAG GGCTCGCGCC CCCGACCGAG GCGGAGGACA CCATCAAGGC CCGCCGCCGC
GCCTATTACC GGGCCATGGC CCGCGGCCCC CAGCCCACCG TCGCGGTGAT CGAGGATCTG
GATTACCCCA ACTGCATCGC CGGGTGGTGG GGGGAGGTCC ATGTGGCGGT CCACAAGGGG
CTGGGCATGG CCGGGGCCGT GACCAACGGG GTGATGCGCG ATCTCGACGT CCATGATGAT
GGCTTCCCGG TGCTGGCGGG CTCCATCGGG GTCAGCCATG GCTTCGTCCA TGTCCGCGAA
CTGGGCTGCG AGGTGTCGAT CCTTGGCCTG CAGGTCGCCG AGGACGATCT CGTCCATGCG
GATCGCCACG GCGCGCTGGT CATCCCCGAG GACGTGATCC CGTCACTCGA GGCCGCCATC
GCCACGGTGA TCGAGAACGA GGCCCTGATT CTCGGGCCTG CCCGGGCGCC GGGGTTCGAC
CTGGGAAAGC TCGAAGAGGC CTGGGCGGTG TTCGAGGCCC GGCGCACCTG A
 
Protein sequence
MDRRPIPPTL LDRLRAVDTP TVCNAIEVVQ GGRGFARLTR GTMQHSRPGM PPMVGRARTA 
RIAGLAPPTE AEDTIKARRR AYYRAMARGP QPTVAVIEDL DYPNCIAGWW GEVHVAVHKG
LGMAGAVTNG VMRDLDVHDD GFPVLAGSIG VSHGFVHVRE LGCEVSILGL QVAEDDLVHA
DRHGALVIPE DVIPSLEAAI ATVIENEALI LGPARAPGFD LGKLEEAWAV FEARRT