Gene Dshi_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3132 
Symbol 
ID5710984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3300204 
End bp3300602 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID641269059 
Producthypothetical protein 
Protein accessionYP_001534466 
Protein GI159045672 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.258717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCC TCCTCCCCCT CCTACTGACC CCCGGCATGG CCGCCGCCCA ACAGGCCGGC 
TGGGGCAATG TCGGTCAACC CGAAGAGACA GGCTTCTCCT GGACCGACCC GCTCTGGCCC
GATTTCTGGA TGGCCTGGAC GCCCGCGACC CTCGCCGTCT TCATCGGCAT CTTCTCGGCC
ATCGCCGTCA TCGGCCTGAT GGAGGGGTTC AAGTACAAGG ACGGGTTGGA GCGCAAGGGC
GTGCTCGGCC TGACCACCAC CCTGGGCGAC CGGCTTTTCA TCACCCTGCT CGGCTCGGTC
TACATCTTCC TCGCCTGGCT CGGCTTCATC GGCCAACCGA TCTGGACCCC GCTTGCCCTC
GCCATCGCCT GGGGCATCTT CACCTTCTGG AAGGTCTGA
 
Protein sequence
MRVLLPLLLT PGMAAAQQAG WGNVGQPEET GFSWTDPLWP DFWMAWTPAT LAVFIGIFSA 
IAVIGLMEGF KYKDGLERKG VLGLTTTLGD RLFITLLGSV YIFLAWLGFI GQPIWTPLAL
AIAWGIFTFW KV