| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3124 |
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| Symbol | qseB |
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| ID | 5710976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3291441 |
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| End bp | 3292106 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269051 |
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| Product | transcriptional regulatory protein QseB |
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| Protein accession | YP_001534458 |
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| Protein GI | 159045664 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTCC TGCTGATCGA GGACCATGCC CCGCTCGCCC GGGCCGTGAT CGACCGGCTG
AGCCTCGACG GTCATGTTGT CGATCACGCC GACAGCATGA CCGAGGCCTG GGATTTCATG
GCGACCACCT CCTATGACCT GATCCTGCTG GACATCATGC TGCCCGACGG GGATGGCCGC
GCCTTCCTGC GCCGCTGCCG CGAGACCGCC GAGGCGACCC CGGTCATCGT GTTGACCGCA
CGCTCAGAGG TCTCCGACCG GGTCAGCATC CTCGATCTCG GGGCCGACGA CTACATGGTC
AAGCCGATCG ATTTCTCCGA ACTCGAAGCC CGGTGCCGGG CGGTCCTGCG CCGCCGCGGC
GGGTCGGCGG CCAACCGGCT CGCCCTCGCG GACCTGGTGT TCGACGCGCT CGCGGGCACG
CTCGAGACCG CGGGCGGCGT CGTCCAGCTC CGCACCCGGG AGCTGCGCCT GTTCGAGACC
TTCGCCAACG CGCCAGGACA GATCTTCTCG AAACCGGCCC TGGTGGACCG GCTGTTCTCC
TTCGACGAGG ATGTGACCGA GAACGCGATC GAGGTCTATG TCGCCCGCCT GCGGCGACAC
CTGGAGCACA GCTCCGTCCG GATCACGACC GTGCGCGGGC TCGGCTACAA GCTGGACCTG
CCATGA
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| Protein sequence | MRFLLIEDHA PLARAVIDRL SLDGHVVDHA DSMTEAWDFM ATTSYDLILL DIMLPDGDGR
AFLRRCRETA EATPVIVLTA RSEVSDRVSI LDLGADDYMV KPIDFSELEA RCRAVLRRRG
GSAANRLALA DLVFDALAGT LETAGGVVQL RTRELRLFET FANAPGQIFS KPALVDRLFS
FDEDVTENAI EVYVARLRRH LEHSSVRITT VRGLGYKLDL P
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