| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3084 |
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| Symbol | |
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| ID | 5710936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3253947 |
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| End bp | 3254924 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641269011 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001534418 |
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| Protein GI | 159045624 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.372213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA CCGCAAGGAC CGAGCGCCTG GGCGCGGATG GGGCGGGCCT TGCACGGGCC
GCGGCGCTGT TGCGCGCGGG GAGGCTCGTG GCGTTTCCGA CCGAGACGGT CTACGGGCTC
GGCGGCGATG CGCGCTCCGA CCGGGCGGTG GCGGGTATCT TCGCGGCCAA GGGGCGGCCC
AGTTTCAACC CGTTGATCGT CCATGTGCCC GACCTCGCGG CGGCCGGCCG GTTGGTGGAC
CTGCCTCCGG CGGGATTGGC TCTGGCAGAG GCCTTCTGGC CCGGGGCGCT CACCCTCGTG
GCGCCCATGC GCGCGGAGGC AGGGATTTCC CCGCTGGTGA CCGCGGGGCT GGAGACGCTG
GCCGTAAGGG TGCCCGCGCA TTCCGCCGCC CAGGCGCTGC TGCGCGGCTT CGACGGGCCG
GTGGCCGCGC CCTCGGCCAA TCCTTCCGGC GGGGTCAGTC CAACCACCGC GGCCCATGTT
CTGGACGGGC TCGACGGAAA AATCGCGGCG GTGCTCGATG GGGGCGCCTG CCCGGTGGGG
TTGGAGTCGA CCATCGTCAG CCTGGCGGGG GAGACCCCGA TGCTCCTGCG GCCCGGCGGC
GTGACCGCGG AGGCATTGGC GCAGGTTCTG GGCGCACCGA TTGCCGAGGG GGCCGGGTCC
GCGACCCAGC CCACAGCGCC GGGGCAGCTG GCCTCGCATT ACGCGCCCGA CGCGCCTGTG
CGGCTAAACG CAACCGCGCG CCAGGATGGA GAGGTCTGGC TCGGCTTCGG CCCGGACTGC
CCGGGCGACA TGAGCCTCTC GGAGAGCGGC GAGCTGGCCG AGGCGGCGGC GCGGCTCTTC
GCGGCCCTGC GGGCGATGGA TGCCCTGGCC GAAGGGCGCC GGATCGCCGT GGCCCCGGTG
CCCCAAACCG GGCTCGGTGC GGCGATCAAT GACAGGCTCC GCCGAGCGGC GGCCCCGAGG
GCGGAAGGCG AGGACTGA
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| Protein sequence | MAETARTERL GADGAGLARA AALLRAGRLV AFPTETVYGL GGDARSDRAV AGIFAAKGRP
SFNPLIVHVP DLAAAGRLVD LPPAGLALAE AFWPGALTLV APMRAEAGIS PLVTAGLETL
AVRVPAHSAA QALLRGFDGP VAAPSANPSG GVSPTTAAHV LDGLDGKIAA VLDGGACPVG
LESTIVSLAG ETPMLLRPGG VTAEALAQVL GAPIAEGAGS ATQPTAPGQL ASHYAPDAPV
RLNATARQDG EVWLGFGPDC PGDMSLSESG ELAEAAARLF AALRAMDALA EGRRIAVAPV
PQTGLGAAIN DRLRRAAAPR AEGED
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