| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3082 |
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| Symbol | |
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| ID | 5710934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3252382 |
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| End bp | 3253191 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269009 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534416 |
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| Protein GI | 159045622 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0669434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAG ACTGGTTGTT GATTGCCCCG ACCCTTTGCG CGCTGGCTTT TGCCGGCCTC
CTGCCGCAGC GCGGGGTCGC GCAGGAATTC ACGGGGGCGA ACCTGGTGCA GGTGGACGTG
CTCCCGGGCT GGCGGGAGGC CGATGGCAGC CATTTCGCCG GGATCCGCAT CCGGATGCAG
CCGGGCTGGA AAACCTATTG GCGCACGCCC GGCGATGGGG GCATCCCGCC GCTCTTCGAT
CTGGCGGCGT CGGGTAACCT CGCCGGGTTC ACGCCGCGCC TGCCCGCGCC GGTAGTATTC
GACGTCGATG GGCTGCGGTC GATCGGTTAC GTGGACGAGG TGGTCTTTCC GCTCCAGTTG
CAAACCGTGC AGGGCGACGC GCCGATCCAG CTCGACGGGG CGCTGCATTT CGGTGTCTGC
GAAGAGGTCT GCGTGCCGGT GGAGGTCCGA CTGAAGGCGG AGTTGACGGC GCCGGGCCAA
AGCAGCGCGA TGATCGCGGC GGCACTGGCC CAGGAGCCGA AGCTGCATGC GGGCGCGATC
AGCTGTGTCT TTACGCCCAC CGAGGACGGG CTGCGTCTGC GGGCGGCGAT CGCCGAGCCT
GCGCGGCCTG GCGAGGTGGC CGTGATCGAG TTGGCGGACC CGACCCTCTG GGTGTCCCAC
GCGGAGACCC ATCGCGAGGG CGGCCAGTTG ATTGCGGATG TAAAGATCTA TGCCGCCCAT
GACGGGCCTG TCCCCATCGA CCGCAGCGGG GTGCGGATGA CGGTCCTTGC CGAGGGAACG
GCTTACGAGC GGCGCGGTTG CGGCGGGTAG
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| Protein sequence | MMKDWLLIAP TLCALAFAGL LPQRGVAQEF TGANLVQVDV LPGWREADGS HFAGIRIRMQ
PGWKTYWRTP GDGGIPPLFD LAASGNLAGF TPRLPAPVVF DVDGLRSIGY VDEVVFPLQL
QTVQGDAPIQ LDGALHFGVC EEVCVPVEVR LKAELTAPGQ SSAMIAAALA QEPKLHAGAI
SCVFTPTEDG LRLRAAIAEP ARPGEVAVIE LADPTLWVSH AETHREGGQL IADVKIYAAH
DGPVPIDRSG VRMTVLAEGT AYERRGCGG
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