| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3021 |
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| Symbol | puuC |
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| ID | 5710873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3190673 |
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| End bp | 3192130 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268948 |
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| Product | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase |
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| Protein accession | YP_001534355 |
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| Protein GI | 159045561 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.143518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.755617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGACA GACCGACATA CGATCCGGGA TTTCCCGGCG ACGAGATCCT GATCGGCGGG
GTGTGGCAGC GCTGCGCCGA CACGCTGGAG GTGATCGACC CGTCCGATGG CACGCCATTG
GCGCAGATCG CCCGCGGGGG TGCTGCAGAG ATCGACCGGG CGGTTGCGGC GGCCCGGGCC
GCACTGGACG GCGATTGGGG CCGGATGAGT GCGACCGAGC GCGGGCGGTG CCTCACCCGA
CTTGGCGCGC TGGTGGCGGG TGAGGTCGAC CGCCTGGCGG AGATGGAGGC CCGCGACGTG
GGCAAGCCCC TGTCCCAGGC CCGCGCCGAT GCCCTGGCGC TGGCGCGGTA TCTGGAATTC
TACGGCGGGG CCGCGGATAA GGTCATGGGG GAAACGATCC CCTATCAGAG CGGCTATACC
GTCTACACCC TGCGCGAGCC GCACGGGGTC ACCGGGCACA TCGTGCCCTG GAACTACCCG
ATGCAGATCA TCGGCCGTTC AGTGGGCGCG GCCCTGGCCA TGGGCAATGC CTGCGTGTTG
AAACCGGCCG AGGATGCCTG CCTGACCGCG CTGGCCTTCG CGCGACTGGC CGAGGCGGCG
GGCCTGCCCC CCGGCGCGCT GAACGTGGTG ACCGGGCTCG GGGCCGAGGC GGGCGCGGCC
CTGTCGGATC ACCCGGGCGT GGATCACCTG AGTTTCACTG GCTCGGTCCC CGTGGGCGCG
GAAGTGCAGG CGACCGCGGC GCGTCACATC ACACCGGTGA CACTGGAGTT GGGCGGCAAG
TCTCCCCAGA TCGTGTTCGC CGATGCCGAT CTCGACGCCG CCCTGCCGTT TCTGGTGAAA
GGCGGGGTGC AGAACGCGGG CCAGACCTGT TCGGCGGCGG CGCGCATCCT GGTGCAGACG
GACGTATTCG ACGCGGTCGC GGACCGTATG GCGGAGGCCT ATCGCGCCCT GACCGTGGGT
CCCGCCCTGA GCGATCCGGC AGTCGGTCCG CTGATCTCGC CGAAGCAGAA GGCGCGCGTC
TCGGCAATGC TGGCGCAGGC CCAACCGGAC CAGATCCTCG CCACCGGGCA TCTGCTGCCA
GAGGCGCCCG AGGGCGGGTG TTACGTCTTG CCCCACCTGC TGGGCGGGAT TGCCGCCGAT
CACCCGCTGG CGCAGCAGGA AATCTTCGGC CCGGTGCAGA TCCTGATGCG CTTCGAGACC
GAGCAAGAGG CGATCGCGCT GGCCAATGGC ACGGAGTTTG GCCTCGTCGC GGGCATCTGG
ACCCGCGACG GCGCGCGCCA AATGCGGATG CCGAAGCGAC TGCGCGCCGG GCAGGTCTTT
GTGAACACCT ATGGCGCGGG CGGCGGGGTC GAGCTGCCCT TCGGCGGGGT GGGCAAGTCC
GGCCATGGGC GCGAGAAGGG GTTCGAGGCG CTTTTCGGCT TCTCGCAACT CAAGACGGTG
GCGACCCATC ACGGCTAG
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| Protein sequence | MLDRPTYDPG FPGDEILIGG VWQRCADTLE VIDPSDGTPL AQIARGGAAE IDRAVAAARA
ALDGDWGRMS ATERGRCLTR LGALVAGEVD RLAEMEARDV GKPLSQARAD ALALARYLEF
YGGAADKVMG ETIPYQSGYT VYTLREPHGV TGHIVPWNYP MQIIGRSVGA ALAMGNACVL
KPAEDACLTA LAFARLAEAA GLPPGALNVV TGLGAEAGAA LSDHPGVDHL SFTGSVPVGA
EVQATAARHI TPVTLELGGK SPQIVFADAD LDAALPFLVK GGVQNAGQTC SAAARILVQT
DVFDAVADRM AEAYRALTVG PALSDPAVGP LISPKQKARV SAMLAQAQPD QILATGHLLP
EAPEGGCYVL PHLLGGIAAD HPLAQQEIFG PVQILMRFET EQEAIALANG TEFGLVAGIW
TRDGARQMRM PKRLRAGQVF VNTYGAGGGV ELPFGGVGKS GHGREKGFEA LFGFSQLKTV
ATHHG
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