| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2930 |
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| Symbol | |
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| ID | 5710781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3087763 |
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| End bp | 3088362 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268856 |
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| Product | putative 2-hydroxychromene-2-carboxylate isomerase |
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| Protein accession | YP_001534264 |
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| Protein GI | 159045470 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.697373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0268517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGC TCGACTACTA TTTCGCGACA ATCTCGCCGT TCACCTACCT GACCGGAGAA
CGGGTCGAAA AGATCGCGGC AAAGCACGGC CTGACGGTCG TCTACAAGCC CCTCGACATC
ATGGCGCTCT TCGGGCGCAC GGGCGGCGTG CCGCCCAGGG ACCGCCACCC CTCGCGGCAG
GAATACCGCC TCCAGGAACT GGCGCGCCAA TCGAAGAAAA CCGGCCTGCC GCTGAACCTC
AAGCCCGCCC ATTGGCCGAC CAACCCCGCG CCCAGCTCTT ACGCGATCAT CGCGGCGCAG
GCGGCGGGCG GCGGCGATGT GGGCAAGCTT GTCAACGCCC TGACCGCCGC CTGCTGGGCC
GGGGAGAAGG ATATCGCCCA GGACGATGTG ATCAGAGACT GCCTGTCGCA GGCCGGGTTC
GACCCGAGCC TTGCGGACAG CGGGCTGCTC AGCGGGGCGG AGGCCTATGC CCGGAACCTC
GAAGACGCGG TCGCCCGCGG CGTGTTCGGC GCACCCTTCT TCATCACCGA GGACGATCAA
CGCTTCTGGG GCCAGGACCG GCTCGATGAT CTGGAGGCGC ATCTCGACGG GCGCCTCTGA
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| Protein sequence | MAQLDYYFAT ISPFTYLTGE RVEKIAAKHG LTVVYKPLDI MALFGRTGGV PPRDRHPSRQ
EYRLQELARQ SKKTGLPLNL KPAHWPTNPA PSSYAIIAAQ AAGGGDVGKL VNALTAACWA
GEKDIAQDDV IRDCLSQAGF DPSLADSGLL SGAEAYARNL EDAVARGVFG APFFITEDDQ
RFWGQDRLDD LEAHLDGRL
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