Gene Dshi_2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2926 
Symbol 
ID5710777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3085029 
End bp3085472 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID641268852 
Productputative MaoC-like dehydratase 
Protein accessionYP_001534260 
Protein GI159045466 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.997708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0377556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACA ACACGCCACG CGGTACAATC TGCATCGAAG ACATCGAGAT CGGCATGACC 
CGGTCCCTGC GCAAGATCAT CTCCGATCGC GATATCGAGA TGTTCGCGGA GGTCTCGACG
GACCGCAATC CGGTCCACCT GGACGAAGAA TACGCCCAGG ACACCCGGTT CGAAGGCCGC
ATCGCCCATG GCATGCTGAC CGCCAGCCTG ATCTCCGCCG TGATCGGGGA GCAGTTACCG
GGGCACGGCA CGGTCTATCT CGGCCAGTCG TTGAAGTTCA TGGGGCCCGT GCGGCCCGGC
GACATGGTGT TCACCGAAGT GACCGTGACC GACATCAACT TCCCCAAGCG CCGGGTCTCG
CTGGAGACCA AATGCTACGT GGACGACAAG GTGGTCCTGA AGGGCGAGGC CCTGGTCATC
GCGCCGAGCC GGAAGTTCGA CTGA
 
Protein sequence
MLDNTPRGTI CIEDIEIGMT RSLRKIISDR DIEMFAEVST DRNPVHLDEE YAQDTRFEGR 
IAHGMLTASL ISAVIGEQLP GHGTVYLGQS LKFMGPVRPG DMVFTEVTVT DINFPKRRVS
LETKCYVDDK VVLKGEALVI APSRKFD