| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2904 |
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| Symbol | |
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| ID | 5710755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3061174 |
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| End bp | 3063948 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268830 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534238 |
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| Protein GI | 159045444 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.656661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.365436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACTC TGGGACCCAT CGCCTTTGCG TCGCCCGGTC TGCTGCTGCT GCTTCTGGTG
CTGCCGATCC TGTGGCTGAT CCTGCGCGCG GTGCCGCCTG CGCCGATCAC GCGGCGGTTT
CCCGGTGTGG CGCTCCTGCT GGGGCTGAAC GACCCGGAGA GCGAGACCGA CAAGACGCCC
TGGTGGCTGT TGTTGCTGCG CGCGCTGGCA GTGGCGGCGA TGATCCTGGG CTTCGCGGGC
CCGATCCTGA ACCCCGACGA GCGGACGCCG GGGACCGGCC CGTTGCTGAT CGCGGCCGAT
GCCAGCTGGG CCTCGGCGCG GGACTGGTCG GCGCGGCAGG ACCGGTTGGA GGCGCTGCTG
GAAGAGGCGG CGCGCGATGG CCGCCCGGTG GCGCTGGTCA CCCTGACCGA CCTGCCACCG
GCGGAGATCG CCTTCGGCGC GCCGGAGGCC GAGCGCGCGC GCCTGCCCGG TGTGCAGCCC
AAGCCCTGGC CGGTGAACGG GCCGGAGGTT CTGGCCTGGT TGGAGGCGGT CGAAGGCGAT
TTCGACACGT TCTGGATGTC GGACGGGCTG GACTGGCCGG AGCGGGACGC GGTGCGCGCG
GCGCTGGAGG CGCGCGGCGC GGTGCGTGTG TTCGAAAGCC CGCGCGCGGT CTTCGGGATC
AGCCCGGCGC GGATCGAGGA TGGTGAGGTG CGGGTCGAAG TGCTGCGGTC CCCGCCCGCC
GGGGAGCGTC CGGTGACGGT GATCGCCCGC GGCCCCGGCC CGAACGGGGT GACCCGGGAG
CTGGGCCGCA CCGAAGTGGT GTTCGAGGCC GGTGAGGCCA CCCAGGAGGC GGTGTTCGAC
CTGCCGCCGG AGCTGCGCAA CCGGGTGACC CGGTTCGAGG TGACGGGGCA GACCACCGCC
GGGGCGGTGA GCCTCGCCGA TGACGCCCTG CGGCGGCGGG AGATCGCGCT CTTCGCCGGG
CGGGACGACC GCGAGGGGCT GGAGCTGCTG ACGCCGCTGC ACTACCTGCG CCGAGCTTTG
GAGCCGACGG CCGACCTGCT GGAGGTGCCG CTGGTCGATG CGCTGCCGGC GAACCCGGAT
GTGATCATCC TGGCGGATGT GGCGCAACTG GCCCCGACCG AGGCCGAGGG GATCACGGAG
TGGGTGGAAA ACGGCGGTCT GCTGGTGCGA TTTGCCGGGC CGCGGCTGGC GGCGTCCGAT
GTCTCGCGGC TCGAAGAGGA CCCGTTGATG CCGGTGCGCC TGCGCGCGGG CGGGCGGTCC
GTCGGGGGCG CGATGAGCTG GGGCGAGCCC AAGGCGCTGC GGCCCTTTTC CTCAAGCTCC
CCCTTCTTCG GCCTGCCCCT GCCGGAGGAT GTGGCGGTCA CCGCTCAGGT AATGGCGCAG
CCGGATCCGA ACCTGCCCGA TCGGGTGGTT GCGGCGTTGA CCGACGGCAC ACCGCTGGTC
ACCCGCAAGG CCTTGGGGCA GGGGCAGGTC GTTCTGTTCC ATGTCACCGC GAATGCGGAA
TGGTCGAGCC TGCCGCTCTC GGGGCTGTTC GTGCAGATGC TGGAGCGGTT GGCGGTGTCG
TCGCGGCCCA CGGCGCTGAC CGCCGAGGCG CTGGCGGGCA CCACATGGGT GCCCGAGCAG
CTGTTGGGGC CCTTCGGGAC GCTGGAGGAG GCCGGGCAGT TGGCCGGGAT CCCGGGCGAG
GATCTGGCGG AGGCCCCCCT GAGCGCGGAG GTGCCGCCGG GGCTTTATGC CGGGGATGAC
CGGCGGCTGG CGCGTAATGT GCTGGGGGCC GGGGCCGTAC TGGCGCCGTC CGTCTGGCCC
CCATCGATCA CGGTCGAGGG GCTGGAAGCG CAGCGGGATC AACCCTTGGC GGGCTTCTTG
CTGACGGCGG CGCTGGCGTT GTTGGCGTTG GATATCCTGG CGGCTCTGTG GCTGTCTGGA
CGGCTGCGGC AGGCCCATGG GGCCGCGGCG GCGGCCCTGG TGGTCGTGCT GCTCGGGCTG
GGGACGCCCC CCGCCACGGC GCAGGAGGGC ATCCCGGATG ACGTGCTGGC GCTGGAGGCG
ACCACGGCGG TGGTGCTGGC CCATGTGCGC ACGGGCGATC CGCGGCTCGA CGAGATCGCC
TATGCGGGGC TGCGGGGGCT GTCGCAAATC CTCACCCAGC GCACCTCGAT CGAGCCGGAC
GATCCGATCA CCGTGGACCT GGAGACCGAC GAGCTTGCGT TCTTCCCGTT CCTCTACTGG
CCGGTATCGG ACAGCCAGCC GCTGCCCTCG GCGGAAGCCT ATGCCAAGCT GAACCGCTAC
TTGCGCGGGG GCGGGATGAT CCTGTTCGAT ACGCGGGATG CGGATGTGGC GCAGTTCGGC
AATGACAGCC GGGGAATGCG GGCGCTGCGG CGGCTGGCGG CCCCGCTGGA CGTGCCACCC
CTCGAGGTGC TGCCGGCCGA TCACGTTCTG ACGCGGACGT TCTACTTACT GCAGGACTTC
CCCGGACGCC ATACCAGCCG CACGCTCTGG GTGGAGGCCG CGCCGCCCGA CGCGGAGCAG
GTCGAGGGAA TGCCCTTTCG CAACCTCAAT GACGGGGTCA CGCCGGTGGT GATTGGCGGG
AATGACTGGG CGGCGGCCTG GGCGGTGGAC GAGGCCGGGC GCGCCATGGT GCCGGTCGGG
CGCGGCTTCT CGGGCCGCCA GCAGCGCGAG CTGGCCTATC GGTTCGGCGT CAACCTGATC
ATGCATGTGC TGACCGGCAA CTACAAATCC GACCAGGTCC ATGTGCCGGC ACTTCTGGAA
AGGCTGGGCC AATGA
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| Protein sequence | MFTLGPIAFA SPGLLLLLLV LPILWLILRA VPPAPITRRF PGVALLLGLN DPESETDKTP
WWLLLLRALA VAAMILGFAG PILNPDERTP GTGPLLIAAD ASWASARDWS ARQDRLEALL
EEAARDGRPV ALVTLTDLPP AEIAFGAPEA ERARLPGVQP KPWPVNGPEV LAWLEAVEGD
FDTFWMSDGL DWPERDAVRA ALEARGAVRV FESPRAVFGI SPARIEDGEV RVEVLRSPPA
GERPVTVIAR GPGPNGVTRE LGRTEVVFEA GEATQEAVFD LPPELRNRVT RFEVTGQTTA
GAVSLADDAL RRREIALFAG RDDREGLELL TPLHYLRRAL EPTADLLEVP LVDALPANPD
VIILADVAQL APTEAEGITE WVENGGLLVR FAGPRLAASD VSRLEEDPLM PVRLRAGGRS
VGGAMSWGEP KALRPFSSSS PFFGLPLPED VAVTAQVMAQ PDPNLPDRVV AALTDGTPLV
TRKALGQGQV VLFHVTANAE WSSLPLSGLF VQMLERLAVS SRPTALTAEA LAGTTWVPEQ
LLGPFGTLEE AGQLAGIPGE DLAEAPLSAE VPPGLYAGDD RRLARNVLGA GAVLAPSVWP
PSITVEGLEA QRDQPLAGFL LTAALALLAL DILAALWLSG RLRQAHGAAA AALVVVLLGL
GTPPATAQEG IPDDVLALEA TTAVVLAHVR TGDPRLDEIA YAGLRGLSQI LTQRTSIEPD
DPITVDLETD ELAFFPFLYW PVSDSQPLPS AEAYAKLNRY LRGGGMILFD TRDADVAQFG
NDSRGMRALR RLAAPLDVPP LEVLPADHVL TRTFYLLQDF PGRHTSRTLW VEAAPPDAEQ
VEGMPFRNLN DGVTPVVIGG NDWAAAWAVD EAGRAMVPVG RGFSGRQQRE LAYRFGVNLI
MHVLTGNYKS DQVHVPALLE RLGQ
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