| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2832 |
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| Symbol | |
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| ID | 5710683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2987697 |
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| End bp | 2988881 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268758 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534166 |
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| Protein GI | 159045372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0190613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.571034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATC GTTTCTTCTC AAGGCGCAAG GCTCTGCGCG CCGGCGTCGC GGCGGCGGCG
GCCACGGTCG CGCTTGCGGC CTGCGATGTG CCGGTGGGCG GCGGCGGCGG CGGGCCGTCG
ATCAATGCCC GCGCCCCCGT GCCCGTGGCA CTTCTCGTCC CCTATGGCAC CGAGAACGCG
AGCGAGGTCA ATCTTGCCCG CTCTCTCGAG AACGCGGCCC GGCTGGCGAT TGCCGACCTC
GACGGGGTGG AGATCGACCT CAAGGTCTAC GCCACCGCCG GCAGCCCCGA GCAGGCGGCG
ACCGTCGCCC GCGAGGCCGT GGCGGACGGG GCGCGCATCC TGCTCGGGCC GGTCTTTTCG
GCGGCCGCGA ATGCCGCCGG TGTGGCGGTC GCACCCCGCG GGATCAACGT TCTGAGCTTT
TCCAACAACA CCGCCATTGC GGGCGGCAAT GTCTTCGTGC TGGGCAACAC CTTCGAGAAT
ACCGCGCGCC GGGTGGTGTC TTACCTGGCC AGCCTGGGCA ACCGGTCGGT CCTCGTCGCC
TACCCGCAGA GCCAGGTCGG CACCGTGGGC CGGGACGCGG TCGTGCAGGC CATCGCGACG
ACCGGGTCGC AGAACGCCGG CACGTTCAGC TACGAGCCGT CCCAGACCGG GGTGATCAAC
GCGGTGCCCG AGATCGCCGG CGCCGTGCGC GCCAGCGGGG CCACCGCTAT CGTTCTGGCG
GATGACACCA CCGGGGGCGT GCCGCTGCTG TCGCAACTGC TGCTGGAGAA CGGGGTCGAT
CCCACCGAGA CCCAGTTCGT CGGCCTGACG CGCTGGGATC AGCCCGCGGC CACGCTGGAG
CTGCCCGGAC TGCAAGGCGG GCTGTTCGCC CTGCCGGACC CGGCGCTGAC CAGTCTTTTC
CAGGATCGCT ACGTGGCTGC CTTTGGCGCG CAGCCGCACC CGATCGCGGG GCTGGCCTAT
GACGGGATCG CGGCCATCGG CGCATTGGTG AAATCGCAGC AGGGCCAGGC CCTGACCACC
TCGGCCCTGA CCCAGGGCGC GGGGTTCGCG GGCGTGTCCG GCACCTTCCG CCTGCGCGCG
GACGGCACCA ACGAGCGCGC GCTCGCCGTG GCCCGGATCG TCGACCGCTC GGTCACCATC
GTCTCCCCCG CCCAGCGCAG CTTCGGCCTC GAAGGCGGGT CCTGA
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| Protein sequence | MFNRFFSRRK ALRAGVAAAA ATVALAACDV PVGGGGGGPS INARAPVPVA LLVPYGTENA
SEVNLARSLE NAARLAIADL DGVEIDLKVY ATAGSPEQAA TVAREAVADG ARILLGPVFS
AAANAAGVAV APRGINVLSF SNNTAIAGGN VFVLGNTFEN TARRVVSYLA SLGNRSVLVA
YPQSQVGTVG RDAVVQAIAT TGSQNAGTFS YEPSQTGVIN AVPEIAGAVR ASGATAIVLA
DDTTGGVPLL SQLLLENGVD PTETQFVGLT RWDQPAATLE LPGLQGGLFA LPDPALTSLF
QDRYVAAFGA QPHPIAGLAY DGIAAIGALV KSQQGQALTT SALTQGAGFA GVSGTFRLRA
DGTNERALAV ARIVDRSVTI VSPAQRSFGL EGGS
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