| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2728 |
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| Symbol | purD |
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| ID | 5713627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2890448 |
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| End bp | 2891710 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268653 |
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| Product | phosphoribosylamine--glycine ligase |
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| Protein accession | YP_001534062 |
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| Protein GI | 159045268 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
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| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0882976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.135316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TTATCCTCGG CAGCGGCGGG CGCGAGCACA GCCTGGCCTG GGCCGCGGCC
CAGAACCCCA AATGCGACCG GCTGATCGTG GCGCCGGGCA ATGCGGGCAT GGCCGAGATC
GCCGAGTGCG CCATGCTGGA TATCGAGGAT CCGGGCGCCG TGGCGAGCTT TGCCGCCGAT
GCGGCCATCG ATTTCGTGAT CATCGGGCCG GAGGCGCCGC TGGCCGCGGG CGTGGCCGAC
CGGTTGCGCG AGGCGGGGGT CTTGTGTTTC GGGCCTTCGG CCGCCGCAGC ACAGCTGGAG
GCATCGAAAA CCTTCACCAA GCAGATCTGC GATGCCACCG GGGCCCCGAC CGCCGCCTAT
GCCCATTTCA CCGACGCCGC CGCCGCGCGC GCCTATGTCC AGGCGCAGGG CGCGCCCATC
GTGGTCAAGG CCGACGGGCT GGCCGCAGGC AAGGGGGTGA TCGTGGCGAT GACCGAGGCC
GAGGCACTGG CCGCCGTCGA CGACATGTTC GGTGGGGCCT TCGGCGGCGC GGGCGCCGAG
GTGGTGATCG AGGAATTCAT GACCGGCGAG GAGGCGTCCT TCTTCGTGCT CTGCGACGGC
GAGACGGTGC TGCCGATCGG CAGCGCCCAG GACTACAAGC GCGCCTTCGA CGGCGACAAG
GGGCCGAACA CGGGCGGCAT GGGCGCCTAT TCTCCGGCGC CGGTGCTGAC CGATGCCATT
GCCGCGCAGG CGCTGGACGA GATCATCCGC CCCTGCATGG CCGAGATGAC GCGACGCGGC
ATGCCCTACC AGGGTGTTCT CTACGCCGGG CTGATGATCG CGGACGGGCG CGCGCGGCTG
GTGGAATACA ATGCGCGTTT CGGCGACCCG GAATGCCAGG TTTTGATGAT GCGGCTGGGG
GCGCAGGCGC TCGACCTGAT GCTCGCCTGT GCCGAAGGGC GGCTGGACGC CGCACAGGTG
ACCTGGGCCG ACGATCACGC CCTGACCGTG GTCATGGCGG CGAAGGGCTA TCCCGGGGGC
TACGAGAAAG GTACGGAGAT CCGCGGGCTG GACGATCTGG TCGAGGACAG CTTCCGCATG
GTCTTTCACG CCGGCACGAA GCGGGCGTCC GGTCGGCTGG AGGCCCATGG CGGGCGGGTG
CTGAACGTCA CCGCCCGGGC CGATACCCTC GCCGAAGCCC AGGCCAGCGC CTACGCGATG
GTCGATGCGA TCGACTGGCC CGAAGGGTTC TGCCGCCGCG ATATCGGCTG GCGGGCGCTC
TAG
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| Protein sequence | MNILILGSGG REHSLAWAAA QNPKCDRLIV APGNAGMAEI AECAMLDIED PGAVASFAAD
AAIDFVIIGP EAPLAAGVAD RLREAGVLCF GPSAAAAQLE ASKTFTKQIC DATGAPTAAY
AHFTDAAAAR AYVQAQGAPI VVKADGLAAG KGVIVAMTEA EALAAVDDMF GGAFGGAGAE
VVIEEFMTGE EASFFVLCDG ETVLPIGSAQ DYKRAFDGDK GPNTGGMGAY SPAPVLTDAI
AAQALDEIIR PCMAEMTRRG MPYQGVLYAG LMIADGRARL VEYNARFGDP ECQVLMMRLG
AQALDLMLAC AEGRLDAAQV TWADDHALTV VMAAKGYPGG YEKGTEIRGL DDLVEDSFRM
VFHAGTKRAS GRLEAHGGRV LNVTARADTL AEAQASAYAM VDAIDWPEGF CRRDIGWRAL
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