| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2727 |
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| Symbol | xseA |
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| ID | 5713626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2888799 |
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| End bp | 2890370 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268652 |
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| Product | exodeoxyribonuclease 7 large subunit |
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| Protein accession | YP_001534061 |
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| Protein GI | 159045267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0564335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.143765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT TCGATCTGAT CGACGATCCC CAGCCGGGGC AGAACGCGCC GGAATTCACG
GTGTCCGAGT TGTCGGGCGC GATCAAGCGC ACCCTGGAGG GCGAATTCGG CCGCGTCCGC
GTCAGGGGCG AGATCGGGCG GGTGATGCGC GCCAAGTCGG GCCACCTCTA TTTCGACCTC
AAGGATGCCC GCGCCGTGAT CAATTGCACC ACCTGGAAAG GGCAGGTGTC GGGCCTGGGC
GTAATGCCCG AAGAGGGGCT GGAGGTCGTG GCCGAGGGCA AGCTGAGCGC GTATGCGCCC
GCCTCGCGCT ACAATATCAA CGTGGACCGG ATCTCGGTGG CCGGGATCGG CGCGCTCATG
GCGATGCTGG AGAAGCGCAA GGCCGCACTG ACGGCCGAGG GCCTGTTCGA GGCGTCGCGC
AAGCAGCCGC TGCCCTTCCT GCCCGAGGTG ATCGGGGTCG TGACCAGCCC TTCGGGCGCG
GTGATCCGCG ACATCCTGCA CCGGCTGCGC GACCGTTGCC CGCGCAAGGT GCTGATCTGG
CCGGTGGCGG TGCAGGGGCA GAACTGCGCG CCCGAGGTGG CGAATGCCAT CCGCGGCTTC
AATGCGCTTG GCCCCGGCGG GCCGTTGCCG CGCCCGGACC TGCTGATCGT GGCGCGCGGT
GGCGGCAGCC TGGAGGATCT CTGGGGGTTC AACGAGGAAA TCGTGGTCCG CGCGGCGGCC
GAGAGCGATA TCCCCCTGAT CTCCGCCGTG GGGCACGAGA CGGACACGAC GCTGATCGAT
TACGCCGCCG ATTGGCGCGC GCCCACGCCC ACGGCAGCGG CCGAGCGCGC CGTGCCGGTG
CGGCTCGACC TGTTGGCCGC CCTGGACAGC CTGGGGTCGC GGATGCTGAC CGGGCTGACC
GGCGGGGTGC GCGCGCGGGC GCAGCGGGTG CGTGACCTGT CGCGGGCTTT GCCGCGCAGC
GAGGATTTGC TGAGCACCCC GCGCCAGCGG CTCGACCATG CAACGGCGCG CCTGCCCGCG
GCGCTGCGCA GTGCCACCCA GACCAAGCGC GGCGCGCTCA CCCAGGCCGC GGCGGTGCTG
CGCCCCCGGC TCCTCGCGGG CCGGATCGAG GCCGAGCGCA AGGATCTGCG TGCGGCCAGC
GCGCGGCTCG GCGCGGCCCT GCCGCGCGCG GTCGCTGCGC AGGCGGAGCG CCTGAGAACA
CGCGTGGCCC GGCTACGGGG CGAGATTTTG ACCCAGGGGC GCGCCCGCGA TCAGCAGCGG
CTGGAGGCCC TCTCGGCCCG CCTGTCCCGG GCAGGCACGG CCCAAGTCCG GACCTGGCGC
AGAACACTCG ACGGGCTCGA CCGGGTGCGC GCCACCGTGG GCTACGAGGC GACCCTCAAG
CGTGGCTACG CCGTGGTCCG CGACCAGGAC AGCATCGTCA CCACCGCCGC GGCCGCGGCA
ACCCATCCCA GCCTGGAGGT ACAATTCGCC GATGGCCGCG TGACCGTGAT CCCGAACGCC
TCCGCCGAGG GCGCCAGGCC CCGAAAGGGC CGGTCGAAAT CCGCCCCGGA CGACCAAGGC
TCGCTTTTCT GA
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| Protein sequence | MSDFDLIDDP QPGQNAPEFT VSELSGAIKR TLEGEFGRVR VRGEIGRVMR AKSGHLYFDL
KDARAVINCT TWKGQVSGLG VMPEEGLEVV AEGKLSAYAP ASRYNINVDR ISVAGIGALM
AMLEKRKAAL TAEGLFEASR KQPLPFLPEV IGVVTSPSGA VIRDILHRLR DRCPRKVLIW
PVAVQGQNCA PEVANAIRGF NALGPGGPLP RPDLLIVARG GGSLEDLWGF NEEIVVRAAA
ESDIPLISAV GHETDTTLID YAADWRAPTP TAAAERAVPV RLDLLAALDS LGSRMLTGLT
GGVRARAQRV RDLSRALPRS EDLLSTPRQR LDHATARLPA ALRSATQTKR GALTQAAAVL
RPRLLAGRIE AERKDLRAAS ARLGAALPRA VAAQAERLRT RVARLRGEIL TQGRARDQQR
LEALSARLSR AGTAQVRTWR RTLDGLDRVR ATVGYEATLK RGYAVVRDQD SIVTTAAAAA
THPSLEVQFA DGRVTVIPNA SAEGARPRKG RSKSAPDDQG SLF
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