| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2725 |
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| Symbol | |
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| ID | 5713624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2886699 |
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| End bp | 2888198 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268650 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534059 |
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| Protein GI | 159045265 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.239457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTT TCAAGAAGCT CAAAAGCCGG ATGTTCAAAT CTTCCTCCAA GCTGGAGGAA
GGGCTCGATG CGATTGTCGA GGAGGGGGGC GAGGCCGATC CGTCCCCGGA GGATCCCCCG
CGCGCCGCGC CCCCGGCACA GCCACGCCCG GCGGTGCCCG AGGATCCCGT CCCGGACCCC
GGCGACACCC CGCCCCCGGT CGACAGCTTC CCCGCCACGC GGGAGACCGA CCCGTCCGAG
GCGCCGACGG ACGACACACC GCACCTGGTC GAAGAAACCA CCGTTCCGAG GGAGCCCTCC
GACGCGCTGG ACGCCGACGG CCTGCCGCGC GCGCCGGAGC CCGACATCCC GGTCGAGGCG
GACCCGATCC CGGTGCCCGA GCCCGATCCC ACGCCGGAGC CCGAGCCCGA GCCTGTTGCG
CCTGCTTCGC CTGTGCCTCA GCCTTCCCCC GAACCCGAAC CCGAACCCGA ACCCGAACCC
GAACCCGAAC CCGAACCCGA ACCCCAGCCT GAGCCTGCCA AAAAGCCAGG GCTGATGGGG
CGGCTTTTCG GGGGCGGGAG TGCGCCCGCG GCGGACCCTG CGCCGCAACC TGCCGCCGCG
CCCACGCCCA TGCCCATGCC TACCCCGACC CCGCCGGCCC CCTCCGCCGC CCCTGCGCCG
ACCCTGCGCC GAGTGATGGA CGACGCGATG CTGGAGAGCC TCGAAGAGGT GCTGATCGCG
GCGGATATGG GCGTCGACAC GGCGCTGCGG GTCAGTGCGA ACATCGCGGA AGGGCGGATG
GGCCGAAAGG TCTCCACCAA CGAGATCAAG CGCATCCTCG CCGACGAGAT CGCCCGCATC
ATGGAGCCGG TGGCCAAGCC CCTGCCGATC TATCCCAAGC GGCCGCAGGT GGTGCTGGTG
GTGGGCGTCA ACGGGTCGGG CAAGACCACG ACCATCGGCA AGCTCGCCAG CCAGTTCAAG
GCCGCGGGCA AATCCGTGGT GATCGCCGCG GGCGATACGT TCCGCGCGGC GGCGGTCGAA
CAGTTGCAGG TCTGGGGCGA CCGGGCCGGG GTGCCGGTGC TGACAGCCCC CGAGGGGTCC
GACCCGGCCT CTTTGGCCTT CGATGCGATC AAGCAGGCGC AGGCCTCGGG CGCGGACCTG
TTGATGATCG ACACTGCCGG GCGGCTGCAA AACCGCGCCG ACCTGATGGA AGAGCTGGCC
AAGATCGTCC GGGTGATCCG CAAGGTGGAC GAGACCGCGC CACACAACAC CCTGCTGGTG
CTGGACGCCA CCACGGGCCA GAACGCGCTC AGCCAGGTGG AGACCTTCCG CAAGCTCGCG
GATGTCTCGG GCCTGGTGAT GACCAAGCTC GACGGCACGG CCAAGGGGGG TGTCCTGGTG
GCGCTGGCCG ACAAGTTCGG TTTGCCGATC CATGCCATCG GGGTGGGGGA GCAGATCGAC
GATCTCGCCC CCTTCGACCC GGAGGAGTTC GCCGATGCAC TCACCGGGTA TGAGCGCTAG
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| Protein sequence | MSFFKKLKSR MFKSSSKLEE GLDAIVEEGG EADPSPEDPP RAAPPAQPRP AVPEDPVPDP
GDTPPPVDSF PATRETDPSE APTDDTPHLV EETTVPREPS DALDADGLPR APEPDIPVEA
DPIPVPEPDP TPEPEPEPVA PASPVPQPSP EPEPEPEPEP EPEPEPEPQP EPAKKPGLMG
RLFGGGSAPA ADPAPQPAAA PTPMPMPTPT PPAPSAAPAP TLRRVMDDAM LESLEEVLIA
ADMGVDTALR VSANIAEGRM GRKVSTNEIK RILADEIARI MEPVAKPLPI YPKRPQVVLV
VGVNGSGKTT TIGKLASQFK AAGKSVVIAA GDTFRAAAVE QLQVWGDRAG VPVLTAPEGS
DPASLAFDAI KQAQASGADL LMIDTAGRLQ NRADLMEELA KIVRVIRKVD ETAPHNTLLV
LDATTGQNAL SQVETFRKLA DVSGLVMTKL DGTAKGGVLV ALADKFGLPI HAIGVGEQID
DLAPFDPEEF ADALTGYER
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