Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2717 |
Symbol | |
ID | 5713616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2878689 |
End bp | 2879210 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268642 |
Product | hypothetical protein |
Protein accession | YP_001534051 |
Protein GI | 159045257 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.631698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACTT CTCTTCCCCC GCGCCTTGCC CGGCTTTGCA CCTTGCTCGG CCATGGCTGT ACCTTGGCCT GCGCCCTGCT GATCGCAGGC TACGGGGTGG TTCTAGTCGA TCCAGAGCCC TTCCTGCCAC CGGTGGAGAC CGCGACCGGC CTGACCCCGG GCAAGCGGGT GGCCCTTGCG ACGCTTGCCG CGGTGATCCT CGCCCCGGCG GGTGTCGCGC TCTGGACAGC GCGCGGGCTT TTCGGGCGTT ACGGGCAAGG CTGTGTGTTC AGCCATTGCA ATGCCGCGGC GATCCGGCGC ATCGGCGCAG CCCTTTTGCT CGGCACCGGG CTGGCCATCG CCGGACGCAC GGCGGCGGTG CTGATCCTGA CCCATGACAA CCCGCCGGGG GCCCGCACGC TCGCGGTGTC CTTCGCGGGA CATGATGTGC TGCTGGGGCT TCTGGGGGCG CTTTTGATGG TGATGGGTTG GGTGCTGGCC GAGGCCACGC GCCAGGCGGA CGAGAACCGG CTCTTTGTCT GA
|
Protein sequence | MQTSLPPRLA RLCTLLGHGC TLACALLIAG YGVVLVDPEP FLPPVETATG LTPGKRVALA TLAAVILAPA GVALWTARGL FGRYGQGCVF SHCNAAAIRR IGAALLLGTG LAIAGRTAAV LILTHDNPPG ARTLAVSFAG HDVLLGLLGA LLMVMGWVLA EATRQADENR LFV
|
| |