Gene Dshi_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2717 
Symbol 
ID5713616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2878689 
End bp2879210 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID641268642 
Producthypothetical protein 
Protein accessionYP_001534051 
Protein GI159045257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.631698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTT CTCTTCCCCC GCGCCTTGCC CGGCTTTGCA CCTTGCTCGG CCATGGCTGT 
ACCTTGGCCT GCGCCCTGCT GATCGCAGGC TACGGGGTGG TTCTAGTCGA TCCAGAGCCC
TTCCTGCCAC CGGTGGAGAC CGCGACCGGC CTGACCCCGG GCAAGCGGGT GGCCCTTGCG
ACGCTTGCCG CGGTGATCCT CGCCCCGGCG GGTGTCGCGC TCTGGACAGC GCGCGGGCTT
TTCGGGCGTT ACGGGCAAGG CTGTGTGTTC AGCCATTGCA ATGCCGCGGC GATCCGGCGC
ATCGGCGCAG CCCTTTTGCT CGGCACCGGG CTGGCCATCG CCGGACGCAC GGCGGCGGTG
CTGATCCTGA CCCATGACAA CCCGCCGGGG GCCCGCACGC TCGCGGTGTC CTTCGCGGGA
CATGATGTGC TGCTGGGGCT TCTGGGGGCG CTTTTGATGG TGATGGGTTG GGTGCTGGCC
GAGGCCACGC GCCAGGCGGA CGAGAACCGG CTCTTTGTCT GA
 
Protein sequence
MQTSLPPRLA RLCTLLGHGC TLACALLIAG YGVVLVDPEP FLPPVETATG LTPGKRVALA 
TLAAVILAPA GVALWTARGL FGRYGQGCVF SHCNAAAIRR IGAALLLGTG LAIAGRTAAV
LILTHDNPPG ARTLAVSFAG HDVLLGLLGA LLMVMGWVLA EATRQADENR LFV