Gene Dshi_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2710 
Symbol 
ID5713609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2871715 
End bp2872920 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID641268635 
Producthypothetical protein 
Protein accessionYP_001534044 
Protein GI159045250 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC CCGCTGACAG TTTCGAGACC GTGATCCTCG GCGCCGGGGC CGCGGGCATG 
ATGTGCGCGG CCCATGCAGG GCCCGGGGTG CTGGTGCTGG ATCACAGCGC CAATCCGGGC
GAGAAGATCC GCATCTCGGG CGGGGGGCGG TGCAACTTCA CCAACATGTA TGCGGGGCCG
GAGAACTTCA TCTCCGCAAA CCCGCATTTC GCCAAATCCG CGCTCAGCCG TTACACTCAA
TGGGATTTCA TCGACCTGGT GGCGCGGCAC GGCATTCCCT ATCACGAAAA GACCCTGGGG
CAGCTTTTCT GTGACACTTC CGCCAAGGAC ATCATCGCGA TGCTGCTGGC GGAGATGGAC
CGGGCGGGCG CGGTGCTGTG GTTGCGCAGC ACGCTCGACG AGATCGCCCA TGACGGCAGC
CGGTTCCGGC TGTCGGTGAC GCGGGAGGGG CGGTCCGTGC GCGTGACCGC GCGGCAGGTG
GTGGTGGCCT GCGGCGGCAA GTCGATCCCC AAGATCGGAG CGTCGGACCA GGGCTACCGC
ATCGCGCGGC AGTTCGGCCA TGCCCTGACC GAGACGCGGC CCGCGCTGGT GCCGCTCACG
TTCGGGGCGG AGGCCGCGTT CGCCGAGTTG TCGGGCCTTG CCAGCCCCGC CCGGGTGACC
GCCAATGGCA CCAGTTTCGA CGAGGCGCTT CTCTTTACCC ATCGCGGGCT GTCGGGACCG
GCGATCCTGC AGGCGTCGTC CTACTGGCGC GAGGGCGACG GGATCACCGT GCGGCTGTGC
CCCGAGACCG ACTTCTTCAC CGCCCTCCGC GACCGGCGCG CCCGGGCCGG GCGGCGGGAC
CTGGCCACGG TGCTGACGGA ATGGCTTCCG AAGCGGCTGG CCCAGACCAT CGCCGCGCAG
GTGGGCGCCA CCGGCAACCT GGCCGACCTG AGCGACACGC GGTTGCGCGA GATCACCGCG
GCGCTGACCG ACTGGCACCT GAAACCCACG GGCACCGAGG GGTATCGCAA GGCCGAAGTG
ACCCTTGGCG GCGTGGAGAC CGCGGCCCTG TCGTCGCGCA GCATGGAGAG CGCGCATCAG
CCCGGGCTCT ACTTCATCGG CGAGGTGGTG GACGTGACCG GCTGGCTCGG CGGGTACAAC
TTCCAGTGGG CCTGGTCCTC GGGCTGGGCC GCGGGCCAAG AGATCGCGGC CCGCGCGGGC
GGCTGA
 
Protein sequence
MAQPADSFET VILGAGAAGM MCAAHAGPGV LVLDHSANPG EKIRISGGGR CNFTNMYAGP 
ENFISANPHF AKSALSRYTQ WDFIDLVARH GIPYHEKTLG QLFCDTSAKD IIAMLLAEMD
RAGAVLWLRS TLDEIAHDGS RFRLSVTREG RSVRVTARQV VVACGGKSIP KIGASDQGYR
IARQFGHALT ETRPALVPLT FGAEAAFAEL SGLASPARVT ANGTSFDEAL LFTHRGLSGP
AILQASSYWR EGDGITVRLC PETDFFTALR DRRARAGRRD LATVLTEWLP KRLAQTIAAQ
VGATGNLADL SDTRLREITA ALTDWHLKPT GTEGYRKAEV TLGGVETAAL SSRSMESAHQ
PGLYFIGEVV DVTGWLGGYN FQWAWSSGWA AGQEIAARAG G