| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2695 |
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| Symbol | |
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| ID | 5713594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2854595 |
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| End bp | 2855953 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268620 |
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| Product | putative aliphatic amidase expression-regulating protein |
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| Protein accession | YP_001534029 |
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| Protein GI | 159045235 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.92573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCC CGGCCCCGGT TCAATCCGCG GGCCCGCCCT GCCCTCCTGC GACGCGCTCT
TTGGGAAACA AGCGCATGAA ATTTTTCAAC AAATCCTTGA TGGCCGCTGG CGTCGCGACG
GCCCTGCTGT CGACCACCGC CCTGGCCCAG GAAGACACGA TCAAGGTCGG TATCCTGCAC
TCGCTGTCCG GCACCATGGC AATCTCCGAG ACAACCCTGA AGGACGTCAT GCTGATGCTC
ATCGAAGAGC AGAACAAGAA GGGCGGCATC AACGGCCAGA TGCTCGAAGC CGTGGTCGTG
GACCCCGCCT CCGACTGGCC GCTCTTTGCC GAAAAGGCCC GTGAGCTGAT CGAGGGCGAA
GGCGTCGACG TGGTCTTCGG CTGCTGGACC TCCGTGTCCC GCAAATCCGT CCTGCCCGTG
TTCGAGGAGC TGAACTCGAT CCTCTTCTAC CCCGTCCAGT ACGAGGGCGA GGAAAGCCAG
CGCAACGTGT TCTACACCGG GGCGGCTCCG AACCAGCAGG CGATCCCGGC GGTCGACTAC
CTGATGAACG AGGAAGGCGT CGAACGCTGG GTGCTCGCGG GCACCGACTA CGTCTATCCC
CGCACGACCA ACAAGATCCT CGAAGCCTAC CTGCAGTCCA AGGGCGTCGC CCCCGAGGAC
ATCATGATCA ACTACACGCC CTTCGGCCAT TCCGACTGGC AGACCATCGT CTCCGATATC
GCCACCTTCG GCTCGGCGGG CAAGAAAACC GCCGTGGTCT CGACCATCAA CGGCGACGCC
AACGTGCCGT TCTACAAGGA GCTGGGCAAC CAGGGCATCT CCGCCGAAGA CATCCCCGTG
GTCGCCTTCT CCGTGGGTGA GGAAGAGCTG GCCGGTCTCG ACACCGAGCC GCTCGTGGGC
CACCTGGCCG CATGGAACTA CTTCATGTCC GTGGACACGC CGGAAAACGA CGCGTTCATC
GACACCTGGA TCGAATTCAT CGGCGACGAG AACGAAGTCA CCAACGACCC GATGGAGGCC
CACTATATCG GCTTCAACAT GTGGGTGAAG GCCGTCGAGG CCGCGGGCAC CACCGACCCG
GATGCGGTGA TCGACAGCAT CGTGGGCGTG TCCGTGCCGA ACCTGACCGG GGGCCTCTCG
ACCATGCTGC CCAACCACCA CATCACCAAG CCGGTGCTGG TGGGCGAGAT CCAGGATGAC
GGCCAGTTCG ACGTGGTCTG GGAAACCCCC GGCCTGGTGC GCGGGGATGC GTGGTCCGAC
CACCTGCCCG AGAGCGCACC GCTGATCTCC AACTGGCTGC CGCCCATGTC CTGCGGCAAC
TTCAACACCG AAACCGGCAC CTGCGGCGGC GGCTCCTGA
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| Protein sequence | MQIPAPVQSA GPPCPPATRS LGNKRMKFFN KSLMAAGVAT ALLSTTALAQ EDTIKVGILH
SLSGTMAISE TTLKDVMLML IEEQNKKGGI NGQMLEAVVV DPASDWPLFA EKARELIEGE
GVDVVFGCWT SVSRKSVLPV FEELNSILFY PVQYEGEESQ RNVFYTGAAP NQQAIPAVDY
LMNEEGVERW VLAGTDYVYP RTTNKILEAY LQSKGVAPED IMINYTPFGH SDWQTIVSDI
ATFGSAGKKT AVVSTINGDA NVPFYKELGN QGISAEDIPV VAFSVGEEEL AGLDTEPLVG
HLAAWNYFMS VDTPENDAFI DTWIEFIGDE NEVTNDPMEA HYIGFNMWVK AVEAAGTTDP
DAVIDSIVGV SVPNLTGGLS TMLPNHHITK PVLVGEIQDD GQFDVVWETP GLVRGDAWSD
HLPESAPLIS NWLPPMSCGN FNTETGTCGG GS
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