Gene Dshi_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2687 
Symbol 
ID5713585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2847605 
End bp2848090 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID641268611 
Productputative pseudoazurin precursor 
Protein accessionYP_001534021 
Protein GI159045227 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID[TIGR02375] pseudoazurin 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0140682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC GCATGACACG GCGTTTCTTC CTTGCATCCA CGGCGGCGGT TTCGGTCGCC 
AGACCGGCCC TCGCACAGTC CCAGACCGTG GTGGAAATGC TCAACAAGGA CCCGGACAAC
CCCAGGCTGC GCATGGTGTT TTCGCCACGG ATCGTGGTCG TGCAGCCCGG CGACACGGTG
AAATTCGCCG CCACCGATCC CAGCCATAAC AGCGCCTCGA TCGACGGGAT GCTCCCCGAA
GGCGCCGAGG CCTGGAACGG CAAGATCAAC GAGGAAATCG TCGTGCCCTT CCCGACACCC
GGCTTCTATG GCTACAAGTG CACACCCCAC GCCGCCACCG GCATGGTCGG TCTCGTGATC
GTCGAGGGCG CGGGCATGAT GGCCAATCTC GAGGCGGCGC AAGGCGTCAA ACAGCGCGGG
CGCGCCGCGA AGGTCTGGGA AGAGATCTGG GCCGAAGTCG CGGAGATGGA GTTCGCCACC
TCCTGA
 
Protein sequence
MTSRMTRRFF LASTAAVSVA RPALAQSQTV VEMLNKDPDN PRLRMVFSPR IVVVQPGDTV 
KFAATDPSHN SASIDGMLPE GAEAWNGKIN EEIVVPFPTP GFYGYKCTPH AATGMVGLVI
VEGAGMMANL EAAQGVKQRG RAAKVWEEIW AEVAEMEFAT S