Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2687 |
Symbol | |
ID | 5713585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2847605 |
End bp | 2848090 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641268611 |
Product | putative pseudoazurin precursor |
Protein accession | YP_001534021 |
Protein GI | 159045227 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR02375] pseudoazurin |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0140682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGC GCATGACACG GCGTTTCTTC CTTGCATCCA CGGCGGCGGT TTCGGTCGCC AGACCGGCCC TCGCACAGTC CCAGACCGTG GTGGAAATGC TCAACAAGGA CCCGGACAAC CCCAGGCTGC GCATGGTGTT TTCGCCACGG ATCGTGGTCG TGCAGCCCGG CGACACGGTG AAATTCGCCG CCACCGATCC CAGCCATAAC AGCGCCTCGA TCGACGGGAT GCTCCCCGAA GGCGCCGAGG CCTGGAACGG CAAGATCAAC GAGGAAATCG TCGTGCCCTT CCCGACACCC GGCTTCTATG GCTACAAGTG CACACCCCAC GCCGCCACCG GCATGGTCGG TCTCGTGATC GTCGAGGGCG CGGGCATGAT GGCCAATCTC GAGGCGGCGC AAGGCGTCAA ACAGCGCGGG CGCGCCGCGA AGGTCTGGGA AGAGATCTGG GCCGAAGTCG CGGAGATGGA GTTCGCCACC TCCTGA
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Protein sequence | MTSRMTRRFF LASTAAVSVA RPALAQSQTV VEMLNKDPDN PRLRMVFSPR IVVVQPGDTV KFAATDPSHN SASIDGMLPE GAEAWNGKIN EEIVVPFPTP GFYGYKCTPH AATGMVGLVI VEGAGMMANL EAAQGVKQRG RAAKVWEEIW AEVAEMEFAT S
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