| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2586 |
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| Symbol | |
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| ID | 5713484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2751482 |
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| End bp | 2752237 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268510 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001533920 |
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| Protein GI | 159045126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000566664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGATT TCAGGACACG GATGCTGGCG GGCGAGATGC TGGCGGGGAC GTTCGTGAAG
ACACCGGCGA TCGAGATGGT GGAGGTGCTG GCGCTCTCGG GGCTGGATTT CGCCTGTCTC
GATGCGGAGC ACGCGCCGTT TGACCGGGGC CGCATCGACG CCTGCCTGGC GCTGGGCCTG
GCGCTGGGCT TTCCGCTGCT GGTTCGGGTG GCCGAGGCGA CGCCGCCTGC GTTGATGCAG
GCGCTGGACG CGGGCGCGGC CGGGGTCGTT GTGCCCCATG TGGACAGTGC CGCGGCGGCG
GCGCGGATCG CCAAGGCGTG CCGTTACGGC CATGGCGGGC GGGGCTTCGC AGGCTCCACC
CGGTCGGCGG GCTACGGCAC ACGGGGCATG GGGGATGTGT TGAGCGACGG GCCGAAGCCG
CTGGTGATCG CGCAGATCGA AGACCCCGAG GGGGTGGACG CCTGCGAGGG GATCGCGGCG
ACGCCGGGGG TCGACGGGAT TTTCCTCGGC CCCGCGGATC TGTCGGTGTC CCATGGCAAG
ATGGACCAGA CCTCGCCGGA GTTGATGGCG GCGATTGACC GGGTGGGGGC GGCCTGCGCG
GCGTCGGGCA AACCCTACAT GACCTTCACG CCGGATGTGG AAAAAGCCGC GGCCTGGCGG
GCGCACGGCT TTTCCGTGTT CTTCGTGGCC TCCGAGCATG CCTGGATGTT GCAGGGCGCG
CGGGCGGTGG CCAAGGGGAT CAAGGCGCTG GGCTGA
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| Protein sequence | MDDFRTRMLA GEMLAGTFVK TPAIEMVEVL ALSGLDFACL DAEHAPFDRG RIDACLALGL
ALGFPLLVRV AEATPPALMQ ALDAGAAGVV VPHVDSAAAA ARIAKACRYG HGGRGFAGST
RSAGYGTRGM GDVLSDGPKP LVIAQIEDPE GVDACEGIAA TPGVDGIFLG PADLSVSHGK
MDQTSPELMA AIDRVGAACA ASGKPYMTFT PDVEKAAAWR AHGFSVFFVA SEHAWMLQGA
RAVAKGIKAL G
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